Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0444 ATGTCGGTGGCGTCACCGTCTCCGGCGGTAGCCACCGCCCAACCACAACCACCACCAACAGCCTCCACCAATAGTAGTGTACCGCCGCCCGCCATCACTCCGCCACCTCAATCTTCTTCATCCCCACCACCAGGCAATTCCACTTTGCCGCCGCCTTCAGCACCTCCGCCATCCTCAACCCCTTCTCCACCTCCCGTGACTCCGTCAGCACCTCCGCCATCCTCAACCCCTTCTCCACCTCCGGTGACTCCTTCAGCACCTCCTCCCGCTGTGCTGTCGCCTCCGCCAGCACAGTCGCAGCCACCTAAGGCATCACAACCCCCTCGGTCTGTCACTCCACCCCCATTGTCTCCTCCTCCTCCTCCTCCACAATCTGTTGCACCTGCGCCACAACCACCGCCTCCTTCTAATTCTAAACCGCCTACTTCTCCTGTACTTTCTCCTCCACCACCAACACAATCACCGGCTCCACCGGTGAGTTCTCCTCCGCCAGCAAGTTCATCCCAACCACCGCCGTCTACCCCATCTCCGGTGCCTTCGCCGCCTACACCGTCGGCAAGTCCGCCAAGAAACTCACCTCCTCCTCCTACACAACCGTCAAACCCTCCCCAAAACTCCCCTCCGCGGCCTCCACCACCATCGTCAAACCCTCCAAAAACCTCACCTACACCACCGACATCAAGTCCCCCGGGTAATTCATCTTCACCGCCATCATCTGTGCCACGACCGAATACTTCACCACCTCCGCCTGCGACTGTGCCACCCCGAGGGTCGCCGCCACCAGCATCAGCACCGCCTGTAAGTTTACCTGCCCCTGCGGCACCTCGGATAAGTCCCCCTAGTTCCCAACCAAGTCCATCTTCAAATTCTACCCCAAACTCATCTCCGCCGCCGCCCATAATTCGAATGGCTCCACCTCCGTTCTCACTTTTGTCACCACCAGCTTCTCAAAATTCCTCCCCACCATCAGTAAGTGGAACAGAAAGTTCAAAGGCTAGAACAAATAATGGCATCAATACTGGTGTTGTAGTGGCCATCGGTGTAGCAGTGGGAATTATAGTGCTTTCCTTAGTTGGAGTTCTTACCTGGTATCTGGTAAGGAGGCAAAAGAAACGGGGACTTGAGAGTGGTAGTTATGTCATGCCATCCGCTTCTGGTTCACTTCCCGAGTCAGATTCATCCTTTTTTAAGACGCATTCTTCAGCTCCTCTTGTACAAAGTGGTTCCGGTAGTGAGTCTGTGTACACGCCTTCTGAGCCGGGTGGACTAGGCAACTCAAGGACATGGTTTACATATGAAGAACTAATCAAAGCTACAAATGGTTTTGCGCCTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATCCTTACCAGATGGGAGAGAAATAGCAGTCAAACAGCTGAAAATTGGTGGAGGTCAGGGTGAAAGGGAATTCAAAGCTGAAGTGGAGATTATTAGTCGCATTCATCATCGTCATTTAGTCTCTTTGGTGGGATACTGCATTTTAGACACCAGAAGGCTGCTCGTCTATGACTATGTCCCCAACAAAACCCTCTATCATCATCTTCATGGGGAAGGTATGCCAGTGTTGAGCTGGGAAAAACGTGTGAAGATTGCTGCTGGTGCAGCTCGGGGAATTGCTTATCTCCATGAAGATTGCAATCCTCGGGTCATTCACAGGGATATCAAGTCCTCAAATATTCTTTTAGATTACAACTTTGATGCTCAAGTCTCAGATTTTGGGCTAGCCAAATTAACCCTTGATGCAGTTACACACATAAGCACTCGCGTCATGGGAACATTTGGATATGTTGCACCTGAATATGCATCAAGTGGCAGATTGAGTGAGAAATCTGATGTATTTTCTTTTGGGGTTGTACTTCTGGAGCTTATTACCGGACGGAAGCCTGTAGATTCATCTCAACCCTTGGGGGATGAGAGCTTAGTTGAATGGGCTCGACCTCTGCTGAGTCATGCAATTGATAATGAGGAATTTGATGGTTTAACAGATCCTAGGCTTGAAAAGAACTATGTTGAAAGTGAGATGTTTCGCATGATTGAAATTGCTGCAACTTGCGTGCGACATTCGGCTGCCAAGAGACCTCGAATGGGACAGGTCGTTAGAGCTTTGGAAAGCATAATAAATTCAGATTTAAACAATGGGATGAGGCCAGGGGAAAGCGAGGCATTCAACTCTGCCCAGCAATCTGCAGAAGTAAGAATGTTTCGGAGGATGGCATTTGGTAGCCAAGATTACAGTACAGACTTTTTTAGTCAGGGAAGTGCGAATTCAACATAG 2313 0.5045 MSVASPSPAVATAQPQPPPTASTNSSVPPPAITPPPQSSSSPPPGNSTLPPPSAPPPSSTPSPPPVTPSAPPPSSTPSPPPVTPSAPPPAVLSPPPAQSQPPKASQPPRSVTPPPLSPPPPPPQSVAPAPQPPPPSNSKPPTSPVLSPPPPTQSPAPPVSSPPPASSSQPPPSTPSPVPSPPTPSASPPRNSPPPPTQPSNPPQNSPPRPPPPSSNPPKTSPTPPTSSPPGNSSSPPSSVPRPNTSPPPPATVPPRGSPPPASAPPVSLPAPAAPRISPPSSQPSPSSNSTPNSSPPPPIIRMAPPPFSLLSPPASQNSSPPSVSGTESSKARTNNGINTGVVVAIGVAVGIIVLSLVGVLTWYLVRRQKKRGLESGSYVMPSASGSLPESDSSFFKTHSSAPLVQSGSGSESVYTPSEPGGLGNSRTWFTYEELIKATNGFAPQNLLGEGGFGSVYKGSLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCILDTRRLLVYDYVPNKTLYHHLHGEGMPVLSWEKRVKIAAGAARGIAYLHEDCNPRVIHRDIKSSNILLDYNFDAQVSDFGLAKLTLDAVTHISTRVMGTFGYVAPEYASSGRLSEKSDVFSFGVVLLELITGRKPVDSSQPLGDESLVEWARPLLSHAIDNEEFDGLTDPRLEKNYVESEMFRMIEIAATCVRHSAAKRPRMGQVVRALESIINSDLNNGMRPGESEAFNSAQQSAEVRMFRRMAFGSQDYSTDFFSQGSANST 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0444 770 Pfam Protein tyrosine and serine/threonine kinase 446 715 IPR001245 GO:0004672|GO:0006468
Acco11g0444 770 MobiDBLite consensus disorder prediction 399 420 - -
Acco11g0444 770 CDD STKc_IRAK 448 718 - -
Acco11g0444 770 ProSiteProfiles Protein kinase domain profile. 442 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0444 770 SUPERFAMILY Protein kinase-like (PK-like) 421 716 IPR011009 -
Acco11g0444 770 PRINTS Proline rich extensin signature 67 84 - -
Acco11g0444 770 PRINTS Proline rich extensin signature 6 18 - -
Acco11g0444 770 PRINTS Proline rich extensin signature 50 66 - -
Acco11g0444 770 PRINTS Proline rich extensin signature 23 44 - -
Acco11g0444 770 MobiDBLite consensus disorder prediction 11 312 - -
Acco11g0444 770 Gene3D Transferase(Phosphotransferase) domain 1 518 737 - -
Acco11g0444 770 MobiDBLite consensus disorder prediction 1 335 - -
Acco11g0444 770 MobiDBLite consensus disorder prediction 313 335 - -
Acco11g0444 770 FunFam proline-rich receptor-like protein kinase PERK8 518 729 - -
Acco11g0444 770 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 349 750 IPR047117 -
Acco11g0444 770 ProSitePatterns Protein kinases ATP-binding region signature. 448 470 IPR017441 GO:0005524
Acco11g0444 770 SMART serkin_6 442 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0444 770 FunFam Proline-rich receptor-like protein kinase PERK8 414 517 - -
Acco11g0444 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Acco11g0444 770 Gene3D Phosphorylase Kinase; domain 1 418 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0444 Acco-ChrAcco11 6620822 6625708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0444 227 766 Trihelix Transcription Factor Family AT1G70460 49.567 7.21e-173 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco11g0444 PK_Tyr_Ser-Thr 2.1e-42 CL0016