Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0440 ATGAAGGGTGGAAAAAGAACGAAGCTTCTTTTCAGCAAGATCTATTCATTCGCATGCTGGAGACAATCATTTGAAGAAGACCATTCACAGATTGGGGGACGAGGTTATTCCAGGGTGATCTTCTGTAATGAACCGGACAAAACTGAGGCTGAATTCCGGGATTATGCTGATAACTCTGTGAGGTCTACCAAATATACTCTTGCTACTTTTTTGCCTAAATCACTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTCTATTTCTTAGTTACTGGAACCTTAGCCTTCACCCCACTTGCTCCCTACATAGCTGTCAGTGCCATCGTTCCTCTGATCATCGTTATTGGGGCAACAATGACTAAAGAAATTATTGAAGATTGGCGGCGGAAGAAGCAGGATATTGAGGTGAACAATAGACTGGTTAAAGTGCATAAAGGTGATGGTGTATTTGAACATACTGCATGGAAGAATCTGAGGGTGGGAGATATAGTGAAGGTAGAGAAGGATGAGTTCTTTCCCGCAGACCTCCTATTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTAGAGACCATGAATTTGGATGGGGAGACAAATTTAAAGCTGAAACAAGGGTTGGAGGTAACTTCTTTCATGCACGAGGATCTCTACTTCCGTGACTTTGAAGCTACTGTTAAATGCGAAGATCCAAATGCCAACTTATACTCTTTTGTTGGGAGCATTGAGTTTGAAGGGAAACAATATCCCCTTTCTCATCAGCAACTTCTTCTGAGAGATTCTAAACTCCGTAATACAGACTTCATATTTGGAGCTGTCATCTTCACTGGTCATGACACCAAGGTTATTCAAAATTCTACTGACCCCCCTTCAAAGAGAAGCAAGGTTGAGAAGAAGATGGATAAAATAATCTATTTCTTGTTTTGTCTTCTTTTTCTAATGGCATCTGTTGGATCTATTTTCTTTGGAATTTCAACTAAAGATGACTTGGAAAATGGGTTGATGAAAAGATGGTATCTCAGACCAGATGATTCTACAATTTTCTATGATCCAAAAAGATCACCATCTGCTGCAATTTTTCATTGTTTGACAGCCTTAATGTTATATGGCTTCTTTATTCCTATCTCCTTGTATGTGTCAATAGAAATTGTTAAGGTCCTTCAGAGCATCTTCATCAACCAAGATATTTATATGTACTATGAGGAAGCAGACAAACCAGCCCATGCCCGTACTTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACAATACTTTCTGATAAAACGGGTACTTTGACCTGCAACTCAATGGAGTTCATAAAATGTTCTATTGCTGGGGTAGCTTATGGCCGTGGTGTTACGGAGGTGGAAAAGGCTATGAATAAAGAAAGTGGTTCACCATTGATTCATGAGGAAGATAGTGCATCAGATGATATCAGGGATTCTACTGTTGCAAAATCCCCAATAAAAGGTTTTAATTTTACAGATGAAAGGATAATGAATGGAAATTGGGTTAAAGAGCCTCATGCGGATGTCATTCAGAAGTTTTTTCACTTATTGGCAACCTGTCATACAGCCATCCCTGAAGTGGATGAAGACACTGGAAATATCTCTTATGAGGCTGAGTCCCCGGATGAAGCAGCCTTTGTGATTGCAGCAAGGGAACTTGGCTTTGAATTCTACAAAAGAACTCAGACAAGTTTATCAATGTATGAGTTGGATCCTGTTTCTGGCAAAAAAGTCGAAAGGATGTATAAGCTTCTCAATGTTTTAGAATTCAACAGCTTGAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGCAAAATTTTTCTATTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGCGGGAGTTTGAAGACAAAACCCTTGAACATGTGCAAGAGTATGCTGATGCAGGTCTAAGGACCTTGATATTGGCCTATCGTGAACTTGATGAAGAGGCATATAGGGAGTTTGATGAAAATTTTTCTCTGGCCAAGAATTCAGTCAGTGCTGATCGGGAAACACTGATTGATGAAGTATCAGATAAGATTGAGAGGAATCTGATCCTTCTTGGTGCCACTGCTGTAGAGGACAAACTCCAACATGGGGTTCCTGATTGCATAGACAAACTTGCTCAGGCAGGAATCAAGATTTGGGTTCTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTATGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATCTGGATTCTCCAGATATTCAAGCATTAGAAAAGACAGGAGAAAAGATTGCTATTACCAAGGCATCAAGGGAAAATATCCGTTGTCAGATATCTGAAGCTACTGTACAACTTGCTGCTTCCATAGGGACTCCTCAGCAAGCATTTGCTCTGATCATCGATGGAAAATCACTTACATATGCTCTTGAGGATGATATGAAGAACATATTTCTGGAACTTGCACTTAATTGCGCATCAGTTATCTGTTGTCGGTCATCACCAAAGCAGAAAGCGCTAGTTACCAGACTTGTTAAATCTGGAACTGGCAAAACAACACTAGCCATTGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAAGCAGACATAGGCATTGGAATTAGCGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGCGATATTGCAATTGCCCAGTTCAGATACCTGGAACGGCTACTCCTTGTGCATGGACATTGGTGTTACCGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAACGTCACTTTTGGATTCACTCTCTTCTTGTATGAAGTGTATGCATCGTTCTCTGGAACACCTGCGTACAATGACTGGTTTTTGTCCCTCTACAATGTCTTCTTCTCATCTCTTCCAGTTATTGCTCTGGGCGTATTTGACCAGGATGTTTCTGCTCGGTACTGTATTAAGTTTCCTCAGTTATATCAACAAGGAGTGCAGAATGTCCTCTTTAGCTGGCGCCGTATACTTACCTGGATGCTGAATGGATTCATAAGTGCAATCATAATTTTCTTCTTCTGCACAAAGGCGATGGAGCTCCAGGCCTTCGATAAGGAGGGAAGAACAGCTGGGAGGGATATCCTCGGAACGACTATGTATACTTGCGTTGTATGGGTTGTAAACTTGCAGATGGCACTTGCCATAAGCTACTTCACCTTGATTCAACATATTTTCATCTGGGGCACCATTGCTTTCTGGTATCTCTTCCTCCTCATATACGGCTACATGCCTCCAGGATTTTCCAAGAATGCCTACTATGTCCTCATTGAAACGCTGGTCCCATCTCCCATGTTCTGGCTTGTGACTTTCTTTGTGGTGATCTCAACCTTAATACCTTACTTCACTTACTCAGCACTTCAGATGAGGTTCTTTCCCATGTACCATGAAGTGATACAATGGTTAAGGTATGAGGGGAAGGCGAATGATCCAGAATGTCGTGCCTTGATGCGACAGAGATCATTGGGGCTAGTGTCCATCGGTTCAACAGCACGCTTAGAAGCTAAGAAGGCTAACCACAATAAAAAACACGACTTCTAA 3588 0.4128 MKGGKRTKLLFSKIYSFACWRQSFEEDHSQIGGRGYSRVIFCNEPDKTEAEFRDYADNSVRSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTPLAPYIAVSAIVPLIIVIGATMTKEIIEDWRRKKQDIEVNNRLVKVHKGDGVFEHTAWKNLRVGDIVKVEKDEFFPADLLLLSSSYEDAICYVETMNLDGETNLKLKQGLEVTSFMHEDLYFRDFEATVKCEDPNANLYSFVGSIEFEGKQYPLSHQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSKVEKKMDKIIYFLFCLLFLMASVGSIFFGISTKDDLENGLMKRWYLRPDDSTIFYDPKRSPSAAIFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIYMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMNKESGSPLIHEEDSASDDIRDSTVAKSPIKGFNFTDERIMNGNWVKEPHADVIQKFFHLLATCHTAIPEVDEDTGNISYEAESPDEAAFVIAARELGFEFYKRTQTSLSMYELDPVSGKKVERMYKLLNVLEFNSLRKRMSVIVKDEEGKIFLFCKGADSVMFERLAKNGREFEDKTLEHVQEYADAGLRTLILAYRELDEEAYREFDENFSLAKNSVSADRETLIDEVSDKIERNLILLGATAVEDKLQHGVPDCIDKLAQAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIIIHLDSPDIQALEKTGEKIAITKASRENIRCQISEATVQLAASIGTPQQAFALIIDGKSLTYALEDDMKNIFLELALNCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCIKFPQLYQQGVQNVLFSWRRILTWMLNGFISAIIIFFFCTKAMELQAFDKEGRTAGRDILGTTMYTCVVWVVNLQMALAISYFTLIQHIFIWGTIAFWYLFLLIYGYMPPGFSKNAYYVLIETLVPSPMFWLVTFFVVISTLIPYFTYSALQMRFFPMYHEVIQWLRYEGKANDPECRALMRQRSLGLVSIGSTARLEAKKANHNKKHDF 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0440 1195 CDD P-type_ATPase_APLT_Dnf-like 57 1013 - -
Acco11g0440 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1153 - -
Acco11g0440 1195 NCBIfam phospholipid-translocating P-type ATPase 55 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco11g0440 1195 NCBIfam HAD-IC family P-type ATPase 836 947 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco11g0440 1195 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Acco11g0440 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1142 IPR023298 -
Acco11g0440 1195 Pfam Cation transport ATPase (P-type) 538 625 - -
Acco11g0440 1195 FunFam Phospholipid-transporting ATPase 699 904 - -
Acco11g0440 1195 Pfam Phospholipid-translocating ATPase N-terminal 40 104 IPR032631 -
Acco11g0440 1195 FunFam Phospholipid-transporting ATPase 541 699 - -
Acco11g0440 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 700 IPR023299 GO:0000166
Acco11g0440 1195 SFLD p-type atpase 406 915 IPR044492 -
Acco11g0440 1195 Gene3D - 118 286 - -
Acco11g0440 1195 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Acco11g0440 1195 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Acco11g0440 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1142 IPR032630 -
Acco11g0440 1195 FunFam Phospholipid-transporting ATPase 116 286 - -
Acco11g0440 1195 Gene3D - 699 904 IPR023214 -
Acco11g0440 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Acco11g0440 1195 SFLD Haloacid Dehalogenase 406 915 - -
Acco11g0440 1195 SUPERFAMILY HAD-like 419 919 IPR036412 -
Acco11g0440 1195 Gene3D - 541 698 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0440 Acco-ChrAcco11 6567114 6574299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0440 9 1186 Primary Pumps ATPases AT1G68710 74.565 0.0 1892