Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0412 ATGGCCACTGTCGCTACAGCTCGAGGAATTGGCGTAGGAGCGACGAAGCTTCACCAAAGACCCAATCATGTTCACTCCAATAAGTCGCTCTTTTTAGGTCACAAACTTCGAAATAAACCCTCTGTTACAGAATCTCCATGCAGTGGAAGAATCACAACATCCTCGAACTCTAAATCGTTCGTGGCCTGTGCTTTGGGAGGCGAATGGCTCGATTCGGTTCACCACCTATTTGTGGGTGTTGGCGTTGGGCTTCCTTGCACGGTTATGGAGTGTGGCGATATAATCTACAGAAGCACTCTTCCGAAATCGAATGGCCTGACGGTTACAGCTCCTGGAGTGGTTTTGGCTCTCGGTGCTGTGTCCTACCTCTGGGCTACGCCTGGTGTGGCCCCTGGTTTCTTTGATATGTTCGTTCTTGCCTTTGTTGAAAGATTGTTCAGACCTACTTATAGAAAGGATGACTTTGTCCTGGGGAAGAAGTTAGGTGAGGGATCCTTTGGTGTAGTTTATAGGGTTTCATTGGCGAAGAAGCCCTCTTCAAAGGAAGGTGACTTGGTCTTGAAGAAGGCTACTGAATATGGTGCAGTAGAAATTTGGATGAATGAGCGTGTTCGGAGAGCTTGTGCAAACAGCTGTGCTGATTATGTTTACGGTTTTCTTGAGAGTTCTGGGAAGAAGAGTGGTGGATACTGGCTTATATGGAAATTTGAAGGGGATGCCACCCTAGCTGATCTAATGCAGAGTAAAGAGTTCCCATATAATGTTGAAACAATGATTCTGGGCAAGGTCCAGGACTTGCCTAAGGGATTGGAAAGAGAAAATAGAATAATTCAAACAATTATGAGGCAGATCTTGTTTGCATTGGACGGTCTTCACTCAACTGGAATCGTGCATAGGGATATTAAGCCCCAGAATATTATTTTCTCTGAAGAATCTCGTACATTCAAGATTATTGATCTTGGAGCCGCAGCAGATTTGCGAGTTGGCATCAACTATATTCCTAATGAGTTTCTTTTGGATCCAAGATATGCTGCCCCAGAGCAGTACATCATGAGCACACAAACTCCCTCTGCACCTTCTGCACCAGTTGCAACTGCACTTTCCCCAGTCCTATGGCAGTTGAATCTACCAGATAGATTTGATATCTATAGTGCTGGCCTAATATTTCTTCAAATGGCAATCCCTGGATTACGCTCCGATAATTGCCTCATACAATTTAACCGTCAGTTGAAGAGGTGTGACTATGATTTGGTTGCCTGGAGAAAAAGTGTAGAAACTCGGTGTGGTCCTGACCTAAGGAGAGGCTTTGACCTTCTGGATTTAGATGGTGGAGTAGGATGGGAACTTCTGACATCAATGGTCCGCTACAAAGCAAGGCAAAGACTCAGTGCAAAAGCAGCATTAGCCCATCCGTACTTTGACAGGGAAAGCTTGTTGGCACTATCTTTCATGCAAAATCTAAGACTGCAGCTCTTACGAGCAACCCAGCAGGATTATGGAGAAGCAGCCAAATGGATCATTCAGCTCATGGCAAAATCTGGAACCTCAGAAGTTGGAGGATTTACTGAAGCTCAGCTCCTGGAACTAAGAAAAATTGAACCAAAGAAGAAGAATAGTCCGCAAAGAAATGCTCTAGCCTCAGCTCTCAAACTTCAGAGGAAAATCATAAAAACATTGAATGAGAGTATGGATGAGCTTGGCCAACGCAGGACAAGCCTTTGGTGGAGCAGATGGATCCCCAGGGAAGAATGA 1752 0.4503 MATVATARGIGVGATKLHQRPNHVHSNKSLFLGHKLRNKPSVTESPCSGRITTSSNSKSFVACALGGEWLDSVHHLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTVTAPGVVLALGAVSYLWATPGVAPGFFDMFVLAFVERLFRPTYRKDDFVLGKKLGEGSFGVVYRVSLAKKPSSKEGDLVLKKATEYGAVEIWMNERVRRACANSCADYVYGFLESSGKKSGGYWLIWKFEGDATLADLMQSKEFPYNVETMILGKVQDLPKGLERENRIIQTIMRQILFALDGLHSTGIVHRDIKPQNIIFSEESRTFKIIDLGAAADLRVGINYIPNEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAIPGLRSDNCLIQFNRQLKRCDYDLVAWRKSVETRCGPDLRRGFDLLDLDGGVGWELLTSMVRYKARQRLSAKAALAHPYFDRESLLALSFMQNLRLQLLRATQQDYGEAAKWIIQLMAKSGTSEVGGFTEAQLLELRKIEPKKKNSPQRNALASALKLQRKIIKTLNESMDELGQRRTSLWWSRWIPREE 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0412 583 SMART serkin_6 155 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0412 583 Gene3D Phosphorylase Kinase; domain 1 141 236 - -
Acco11g0412 583 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 64 558 - -
Acco11g0412 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Acco11g0412 583 Pfam Protein kinase domain 157 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0412 583 ProSitePatterns Protein kinases ATP-binding region signature. 161 188 IPR017441 GO:0005524
Acco11g0412 583 Gene3D Transferase(Phosphotransferase) domain 1 263 479 - -
Acco11g0412 583 SUPERFAMILY Protein kinase-like (PK-like) 140 475 IPR011009 -
Acco11g0412 583 ProSiteProfiles Protein kinase domain profile. 155 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0412 583 FunFam Serine/threonine-protein kinase STN7, chloroplastic 264 478 - -
Acco11g0412 583 CDD STKc_SNT7_plant 159 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0412 Acco-ChrAcco11 5923906 5927953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0412 273 474 Core Cell Cycle Gene Families AT2G38620 30.986 1.27e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Acco11g0412 Pkinase 2.8e-19 CL0016