Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0405 ATGCTGCGTCAGAAAATGGGGTTTCGAGAATATGTTGAAGCGTTAGAAGAAGAACGCCAGAAGATTCAGGTGTTCTCTAGAGAACTTCCGCTTTCACTTGAGCTTGTCTCGCAAGCCATTGATGCTTATAGGCAACAACTTTCTGGAACGACGGAGTACAATGTTCAAGGACAATCGGATTGTTCGGAGCAGACGTCAATGGAAGAAGGACCTGTTCTTGAAGAGTTTATTCCGATCAAGAAAAGAGATTCCCTTGATTGTGACAACGAAGAAGACGAAGATGAACAACATTCGCATAAGCTCAAGATTCTCAAGGAAAACGATACTAAGAACTCTGATAAGAGAAAATCCGACTGGCTCAGATCCGTCCAGCTCTGGAATCCAGATCCCCCAACTAAAGAGGATTTGCCGAGAAAAGCGATGGTAGTGGAAGTGAAGAGAAATGGAGGTGCGTTTCAGCCATTTCACAGAGAAGACGATAATAATGTTGGAAAGACGAACAATAACAACAACAACAACAACACATCGGCGGCTAAACCTGCATCTCCGGCTGCCTTGCCTGCAATGAGCTCCACCGCCGGCGGCGGAGGCGGAAGCAAGGGATCGGAGGAGAAAGAAGGGCAGGGTCAGAGGAAGCAACGGCGGTGCTGGTCACCGGAATTACACAAACGCTTCTTACAAGCCCTTCAACAACTCGGCGGTCCAGATTCTGCAACTCCCAAGCAGATCAGAGAGCTCATGAGGGTGGATGGCCTCACAAACGATGAAGTCAAAAGTCACTTGCAGAAATTCCGTCTGCACACAAGAAGACCAAGTCCTATGATTCACAACAATGCTACATCGCAAACAGCTCCGTTTGTTATTGTTGGGAACATATTTATGCAGCCACCAGAATATGCAGCAGCAGTGGCAACTTCAACAGCATCAGGCGAGGTGACCACAGTGAGCACGCCAACCGGAATTTATGCGCCGGTGGCGGCGCATCCTCCTATGCCTGTGGTGGTGCCGCCTATTGATAAGAAGGCTCAGGTGAAGCAATTGGAGCAGTCACATTCCGATGACGAAAGGGTGAATCATGGTAGTGAAGGAGCTGTTCATTCAAATTCTTCTCCAGATTCATCATCTTCCACACACACTACTTCTCATTCTCATGGATATTGA 1161 0.4772 MLRQKMGFREYVEALEEERQKIQVFSRELPLSLELVSQAIDAYRQQLSGTTEYNVQGQSDCSEQTSMEEGPVLEEFIPIKKRDSLDCDNEEDEDEQHSHKLKILKENDTKNSDKRKSDWLRSVQLWNPDPPTKEDLPRKAMVVEVKRNGGAFQPFHREDDNNVGKTNNNNNNNNTSAAKPASPAALPAMSSTAGGGGGSKGSEEKEGQGQRKQRRCWSPELHKRFLQALQQLGGPDSATPKQIRELMRVDGLTNDEVKSHLQKFRLHTRRPSPMIHNNATSQTAPFVIVGNIFMQPPEYAAAVATSTASGEVTTVSTPTGIYAPVAAHPPMPVVVPPIDKKAQVKQLEQSHSDDERVNHGSEGAVHSNSSPDSSSSTHTTSHSHGY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0405 386 MobiDBLite consensus disorder prediction 344 361 - -
Acco11g0405 386 MobiDBLite consensus disorder prediction 343 386 - -
Acco11g0405 386 Gene3D - 211 269 - -
Acco11g0405 386 Coils Coil 8 28 - -
Acco11g0405 386 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 352 IPR044787 GO:0003700|GO:0006355
Acco11g0405 386 Coils Coil 87 107 - -
Acco11g0405 386 NCBIfam myb-like DNA-binding domain, SHAQKYF class 212 267 IPR006447 GO:0003677
Acco11g0405 386 MobiDBLite consensus disorder prediction 150 217 - -
Acco11g0405 386 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Acco11g0405 386 MobiDBLite consensus disorder prediction 164 180 - -
Acco11g0405 386 MobiDBLite consensus disorder prediction 362 386 - -
Acco11g0405 386 FunFam Myb family transcription factor 211 269 - -
Acco11g0405 386 Pfam Myb-like DNA-binding domain 214 263 IPR001005 -
Acco11g0405 386 MobiDBLite consensus disorder prediction 83 116 - -
Acco11g0405 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 209 269 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0405 Acco-ChrAcco11 5813445 5815083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0405 10 327 G2-like Transcription Factor Family AT1G68670 49.258 1.71e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco11g0405 Myb_DNA-binding 3e-06 CL0123