Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0385 ATGGAGGGATTTGCGCCGGCGAAGGCCACGACGTCGTGTGGGTATTTGAGCTGGCAGGAGGTGTTTGTCTCCGGCGGGGAAAGCAAGGGAAGGAAGGAGGTGCGTTATCTTCTCAAAAGAAGCGATGGGAGCTCAGATCTGGCTGTGGTTGGGAGAGAAAAGAGCACGAGGCATATGTCTTATAACTATTCTATTAGAGATGAGGTCCTTGCGTTCATTGGGTCGTCGACCCCGTCGCTGTTGAAGCTCAAATCACGCCAAGATGTTATTGATTGGTTGAATTCCATTGTTTCAGATTCACAACGCGAGGGTGCGTCTATCAGGGAACAGAAAGGTGGCATCGGACACAACATGGTAGCCTCGAAGGATAATCGATTGCGGAAGCTGGGCCATTGTATAAAGGAGTTCTCATGGTCAGGGTCTTCGTGGACTTGCAAGAAACGAAGAAAGCACTATAAGTCATTTAGATGGAATAATTTAAAAATATCAGTTCATGATTTCGTATATGTTTTAGCAGAAGAAGATAAGCGTCTCGTTGCCTACCTGGAAGACATGTACGAGGACTCCAGAGGCAATAAGATGGTTATGGTACGCTGGTTTCACAAAATTGATGAGGTTGGTAATTTTTTGCCTCACAGTTTTAGTGACAGAGAGATTTTCTTTTCTCTTTGTCTTCAAGATCTGAGCGTCGAATGCATAGATGGATTGGCTACTGTGCTCAGCCCCCAGCATTACGAAAAGTTTCAGAACGAAGCAAGGCATACTATGTTGGATCCATTTGTCTGCGACAATCAATTCGACAATGAAGATGTGAAGCACTTTGATATAACTCAAGTTAAAGGTTACTGGAGACAGGAAATCCTCAGATATATGTATACCCATTCTGACGCAAAATCTAATGGAAGTTCTCAGCAATCTGATGATAAACTGGAAGAAGAGGACATCCAGTTTACGTCCAGGATAAGACCTAAAAAGAGGCTGCGCCTGGCAAAAATTGATGGTGAAGGTGCTGCTATTGAAACGCGAAGTTTGAATGATAGCGGAAATGAAGCTAAAAGAAAAAATGGAAACAGTTCCTTAAAAGAAGTTGGCCCCACAGCCAGCAAAGACACAAAAGAAAACGCTTTAGAGTATTTAGCAATAGGTTCTCAGGTTGAGATCCTCTCTCAGGACAGTGGCATTAGAGGCTGCTGGTTTAGGGCTTCGATCATAAAGAAGCACAAAAATAAAGTGAAGGTGCAGTATCAAGACCTTCAGGATGCAGTTGATGAATCTAGGAAGCTTGAGGAATGGGTTTCTGCATCTAGAATTGCGGCACAGGACCACTTGGATATCCGATTGAATGGACGGTCTACCATACGCCCATCCCCTCAGTCTAGTCTGTATAAATTTTCTTGGGTGGTTGGTTCCATTGTGGACGTCTGGTGGCATGATGGTTGGTGGGAAGGCATCATTGTTCAGAAAGAGTCTGAAGCTAAGTGTCATGTTTATTTCCCAGGGGAGAAGTTAGTGTCAATATTCGGATCTGGTGACTTAAGACGAGCTCAAGAATGGACAGCGAGTGGGTGGTTGAAAGTAAACGAAAGGCCTGACCTTGTTAGTTCTATATTATCCAGCTTAAAAACATCACAAGATCCCAGCAAATCGGCCGCAGCTGCATCTGCCGTAGATGCTGGACATTCAAAGCAAGGCGGGAATAATAATAATGCTAATCCTGAAGGTGATAGTAAATCAAGAAAGCTCGAGCCGGTTCCAGACCTTTCAAAGGATGATCTCCTGTCTCAGTTAAGATGGAAGTCATCCAGGAAGAGATGCCGAAGCCATGGCCGAAAGTCCCCAGATTCCTCAGACCGCAATACTTCTGACAGTTATATGATCTCAGCATCTTTAAAATTGGTTGATCATGACGGCTACAAATACAGCAGGGGGGATCAGGCCATGTTTAACTCTTCAGTGGTGCCCTCTCTAACTTCTAACTTGGTCATGTGTAGGTGA 1995 0.4446 MEGFAPAKATTSCGYLSWQEVFVSGGESKGRKEVRYLLKRSDGSSDLAVVGREKSTRHMSYNYSIRDEVLAFIGSSTPSLLKLKSRQDVIDWLNSIVSDSQREGASIREQKGGIGHNMVASKDNRLRKLGHCIKEFSWSGSSWTCKKRRKHYKSFRWNNLKISVHDFVYVLAEEDKRLVAYLEDMYEDSRGNKMVMVRWFHKIDEVGNFLPHSFSDREIFFSLCLQDLSVECIDGLATVLSPQHYEKFQNEARHTMLDPFVCDNQFDNEDVKHFDITQVKGYWRQEILRYMYTHSDAKSNGSSQQSDDKLEEEDIQFTSRIRPKKRLRLAKIDGEGAAIETRSLNDSGNEAKRKNGNSSLKEVGPTASKDTKENALEYLAIGSQVEILSQDSGIRGCWFRASIIKKHKNKVKVQYQDLQDAVDESRKLEEWVSASRIAAQDHLDIRLNGRSTIRPSPQSSLYKFSWVVGSIVDVWWHDGWWEGIIVQKESEAKCHVYFPGEKLVSIFGSGDLRRAQEWTASGWLKVNERPDLVSSILSSLKTSQDPSKSAAAASAVDAGHSKQGGNNNNANPEGDSKSRKLEPVPDLSKDDLLSQLRWKSSRKRCRSHGRKSPDSSDRNTSDSYMISASLKLVDHDGYKYSRGDQAMFNSSVVPSLTSNLVMCR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0385 664 CDD Tudor_Agenet_AtDUF_rpt1_3 379 437 - -
Acco11g0385 664 MobiDBLite consensus disorder prediction 560 574 - -
Acco11g0385 664 ProSiteProfiles BAH domain profile. 160 277 IPR001025 GO:0003682
Acco11g0385 664 MobiDBLite consensus disorder prediction 342 365 - -
Acco11g0385 664 MobiDBLite consensus disorder prediction 341 368 - -
Acco11g0385 664 Pfam BAH domain 161 270 IPR001025 GO:0003682
Acco11g0385 664 MobiDBLite consensus disorder prediction 600 622 - -
Acco11g0385 664 Pfam Agenet domain 382 458 IPR008395 -
Acco11g0385 664 Gene3D - 132 276 IPR043151 -
Acco11g0385 664 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 369 587 - -
Acco11g0385 664 MobiDBLite consensus disorder prediction 296 315 - -
Acco11g0385 664 SMART BAH_4 160 277 IPR001025 GO:0003682
Acco11g0385 664 MobiDBLite consensus disorder prediction 548 586 - -
Acco11g0385 664 Coils Coil 408 428 - -
Acco11g0385 664 SMART agenet_At_2 464 520 IPR014002 -
Acco11g0385 664 SMART agenet_At_2 377 443 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0385 Acco-ChrAcco11 5563138 5566303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0385 389 518 PHD Transcription Factor Family AT5G58610 30.147 1.22e-06 50.1