Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0363 ATGGACCACCTCAAAAAGAGACCAGAAGAGAACCCATTAGACCTCAACAATTTACCTGATGACTTCCATAGGGATGGCAAGCAAGTCCTCGATGATATCTCCTCATCTGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGAGGGAAAGGAAGAGTGTGGCAAGGTCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAGGCTCTCGGTGGTCACATGAACCGTCACCGCCAAGAAAGAGAAACCGAAACACTGAACCAAGCTCGCCAACTCGTCTTCCGTAGTGATCACACCATAGCCGCCCAAGGGGCCCCTCACTTAGGGTGCTGCCAACCAGTAGTAGCGGGAGGCTACGGAGGCGGCAACATGGGAGATCCAACAATGCCTCTGAGGTTTCCAAGGTACTTGTCGGGTTCATCCACAAGCCACATATCTTCACCGCCACCTCCTCCTCCTCCACCGCCACCGCAGCAGTACATGTACACGTCTCCGACGACGTCGTCGCGACCATATCATCAACACCAGCACCACCAAGTGAACGACTACTATGTGGGTCACGTTCTGCACAACTACGCGGGCGAGTCATCGAGCTACACCTGTATCGGGGCACCAGTGGGTCAAGGAGGAGGGTTTATTGGTGGCAAGGACGGGACACTGCAGAATCAGGATGAGGCTTTGAATTGGGGAAGGAGCTATTCAGCGATCAATCGGTTTCAAGATGGCTTCTAA 735 0.5293 MDHLKKRPEENPLDLNNLPDDFHRDGKQVLDDISSSGCRKKKSGGKEGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRSDHTIAAQGAPHLGCCQPVVAGGYGGGNMGDPTMPLRFPRYLSGSSTSHISSPPPPPPPPPPQQYMYTSPTTSSRPYHQHQHHQVNDYYVGHVLHNYAGESSSYTCIGAPVGQGGGFIGGKDGTLQNQDEALNWGRSYSAINRFQDGF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0363 244 Gene3D Classic Zinc Finger 33 108 - -
Acco11g0363 244 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Acco11g0363 244 MobiDBLite consensus disorder prediction 1 49 - -
Acco11g0363 244 MobiDBLite consensus disorder prediction 146 162 - -
Acco11g0363 244 SUPERFAMILY beta-beta-alpha zinc fingers 53 101 IPR036236 -
Acco11g0363 244 PANTHER ZINC FINGER PROTEIN JAGGED 37 221 IPR045320 GO:0003700
Acco11g0363 244 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Acco11g0363 244 MobiDBLite consensus disorder prediction 131 178 - -
Acco11g0363 244 FunFam Zinc finger protein STAMENLESS 1 31 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0363 Acco-ChrAcco11 5080723 5084046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0363 9 210 C2H2 Transcription Factor Family AT1G13400 44.762 1.59e-33 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0363 11 5080723 5084046 Acco11g0363 11 5080723 5084046 ECH