Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco11g0349 | ATGTCTTCCACAGCTACAAAACCAGAGATTGGGCCTAATGAAGAAGAAGCTGAGCTCAGAAGAGGACCTTGGACTCTGGAAGAAGACAGTTTACTCATACACTGTATCGCTCTTCATGGCGAAGGTCGTTGGAACATGTTAGCCAAAACTGCAGGATTGAAGAGAACAGGAAAGAGTTGCAGATTGAGGTGGCTCAACTACTTGAAACCAGACATCAAGAGAGGGAATCTAACACCACAAGAGCAAATTTTGATCCTTGAGCTCCATTCCAAATGGGGCAACAGGTGGTCAAAAATTGCTCAGCATCTGCCAGGAAGAACAGACAATGAGATCAAGAATTATTGGAGGACAAGAGTTCAGAAACAGGCACGTCAGCTAAATATTGAGTCTGGTAGTGACAGATTCATCGATGCTGTTCGATGTTTCTGGATGCCTAGGTTGTTACAAAAGATGGAACAAAACTCTTCATCTTCATCATCTTCCTCGTCCTCTGTCATCAACATGAACTCTGATAATTCCCTGTCTTCTCCACAAGGAGAATTCACAGATATTGCAGCAAATCACAGAAGCACAAGCACCACCAACTACAACAACAATAATTATAATCTTAATTTCCCAGATCATTGTTCTCTGCATTTACAAGAACCGTCGTCTGAAATATCGGATAACCCGACAAGTACTGCTCTTATTCCTCCAGTGTTGGAGAACCACAACAACAACGTTTGGTTCAATAATCCAGTTCAAGATCATAGTTATGGCATGGAAGGGCTAAACTTGGAGCCATTTTCTTCAAGAACTGAGAGTAATAATTATGGGATTCCCCAGTTTGATTATAATTGTCAGAGTTCAGAAAGTGACCAATGGGTGTCAAGCAGCATGGGAGAATATTCTTTGTGGAACTTGGATGATATGTGA | 915 | 0.4164 | MSSTATKPEIGPNEEEAELRRGPWTLEEDSLLIHCIALHGEGRWNMLAKTAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQILILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSDRFIDAVRCFWMPRLLQKMEQNSSSSSSSSSSVINMNSDNSLSSPQGEFTDIAANHRSTSTTNYNNNNYNLNFPDHCSLHLQEPSSEISDNPTSTALIPPVLENHNNNVWFNNPVQDHSYGMEGLNLEPFSSRTESNNYGIPQFDYNCQSSESDQWVSSSMGEYSLWNLDDM | 304 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco11g0349 | 304 | SMART | sant | 73 | 121 | IPR001005 | - | |
| Acco11g0349 | 304 | SMART | sant | 20 | 70 | IPR001005 | - | |
| Acco11g0349 | 304 | FunFam | Myb transcription factor | 21 | 73 | - | - | |
| Acco11g0349 | 304 | CDD | SANT | 78 | 117 | IPR001005 | - | |
| Acco11g0349 | 304 | Gene3D | - | 77 | 122 | - | - | |
| Acco11g0349 | 304 | Pfam | Myb-like DNA-binding domain | 21 | 68 | IPR001005 | - | |
| Acco11g0349 | 304 | Pfam | Myb-like DNA-binding domain | 74 | 117 | IPR001005 | - | |
| Acco11g0349 | 304 | SUPERFAMILY | Homeodomain-like | 19 | 115 | IPR009057 | - | |
| Acco11g0349 | 304 | CDD | SANT | 23 | 68 | IPR001005 | - | |
| Acco11g0349 | 304 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 15 | 190 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
| Acco11g0349 | 304 | MobiDBLite | consensus disorder prediction | 153 | 180 | - | - | |
| Acco11g0349 | 304 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 16 | 68 | IPR017930 | - | |
| Acco11g0349 | 304 | FunFam | MYB transcription factor | 77 | 119 | - | - | |
| Acco11g0349 | 304 | Gene3D | - | 18 | 74 | - | - | |
| Acco11g0349 | 304 | ProSiteProfiles | Myb-like domain profile. | 16 | 68 | IPR001005 | - | |
| Acco11g0349 | 304 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 69 | 123 | IPR017930 | - | |
| Acco11g0349 | 304 | ProSiteProfiles | Myb-like domain profile. | 69 | 119 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco11g0349 | Acco-ChrAcco11 | 4875763 | 4876963 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco11g0349 | 16 | 160 | MYB Transcription Factor Family | AT1G68320 | 82.069 | 2.46e-86 | 258 |
Transcription factors information