Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0344 ATGGAGGACCACCAAATTCTCTTCCCTTCTAAACCAACAAACCCTTTAAAGCTTTTCGGCTTCAGCGTCCACCACAACAACGTATTCCAAGTTGAAGAAGATGAAGATGTCTCTGCAGGCCCAATCTCCAAGCCCACTTCCCCATCTGGATCACCGGATTCCTCCATGTCCACCGGCGCCGGAGGAGCTTTCCCCGCTTCCTCCTGCGGCGACAGGAAATACGAGTGTCAGTATTGTTGCCGCGAGTTTGCCAACTCTCAGGCCCTCGGTGGTCACCAGAACGCTCACAAGAAAGAACGCCAGCAGCTGAAGCGAGCCCAATTACAAGCCTCACGAAACGCCGTTTCGTTCGTTAGGAACCCGATGATCTCCGCTTTCGCCGCTCCGCCTCATTTGCTTTCTCCGGCAGGCCACGTCATGTTTCCGGCAGCCAATCCTTCGTCCTGGGTCTATGTACCGCCACGTGCCGCTCATCCGCCGTTCAACGTGTCAGTATCACACGGGTGCGTGTTTCCTTCGCCGACGAATAGTACTATCTGTAGTCAGAGTGGGAGATCGGCCGGCGGTGGGATGTTATCCTGTGGTGGCAGCGCAGGGGAGTCCATGGGGCCTCAAGTACATGGTAGGGCCCATGGGCCATCTTTAAGTAGATTTTCAAAAGGGGATGGTGGGCCCAACTTCGATGACCCGTTGGGTTTGGACTTGCATCTAAGCCTTGCGCCTTCTGCGCCGTGA 735 0.5551 MEDHQILFPSKPTNPLKLFGFSVHHNNVFQVEEDEDVSAGPISKPTSPSGSPDSSMSTGAGGAFPASSCGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAVSFVRNPMISAFAAPPHLLSPAGHVMFPAANPSSWVYVPPRAAHPPFNVSVSHGCVFPSPTNSTICSQSGRSAGGGMLSCGGSAGESMGPQVHGRAHGPSLSRFSKGDGGPNFDDPLGLDLHLSLAPSAP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0344 244 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Acco11g0344 244 Gene3D Classic Zinc Finger 65 121 - -
Acco11g0344 244 MobiDBLite consensus disorder prediction 196 229 - -
Acco11g0344 244 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Acco11g0344 244 MobiDBLite consensus disorder prediction 33 62 - -
Acco11g0344 244 PANTHER ZINC FINGER PROTEIN 5 12 243 IPR044299 GO:0010090
Acco11g0344 244 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
Acco11g0344 244 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0344 Acco-ChrAcco11 4774766 4775500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0344 5 242 C2H2 Transcription Factor Family AT1G68360 45.318 7.16e-49 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0344 11 4774766 4775500 Acco11g0344 11 4774766 4775500 ECH