Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0343 ATGTTCTGGAACTACAAAGAAAGGAATGACACCTCTTACAGATTGGTGGTGCAGAAGGGGATGGGTTCTAAGATGGAAGGAACGTCTGCCCCAGCAGTTCGACGAGATCCATATGAGGTATTGTCTGTGTCAAGGGAAGCAAGTGATCAGGAGATAAAAACCGCTTACAGAAAGCTTGCCCTCAAGTATCACCCTGACAAAAATGCCGACAATCCTGCAGCTTCAGAACTCTTTAAAGAGGTTGCATTTTCATACAGTATCTTGTCTGACCCAGAGAAGAGAAGGCAATATGACAGTGCTGGCTTTGAGGCGCTTGAAGCAGACAGCATGGACATGGAAGTTGACTTGTCCAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGCTGGGTGTCCCTATTAAGACCACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGAACAGTTACAGTCAGACCCCTTCCAATTGGAACCTCAGTTAGTGGAAAGGTGGAGAAGCAAGGTGCTCATTTCTTTGGTGTGACAATAAATGAACAGCAAGCTGAGTCAGGTGTTGTAATAAGAGCCACATCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGTAAATGGTGGATATGGCTTAGCATTGCAGGAAGACAGTGAAAAGGCTGGCAGGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGATTGGATTCAACTGTGAATGCTTTAGCAATGGCAAAGGATCCTGAAGGTGCCTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTTTCGCAACTAAAGCCTGGCACTCATATATTTGCGGTTTATGGAGATAACTTCTTTAAGACTGCCTCCTATACTATTGAGGCGCTTTGTGCAAAGTCCTATGAGGATACCACCCAAAAACTTAAGGACATTGAGGCTAAAATTTTACTAAAGAGGAATGAGCTACGCCAATTTGAAACAGAATATAGAAAGGCATTGGCGCACTATCAAGAAGTGACTGAACGATACACCAAAGAAAAACAAGAAGTAGACGAGCTTCTGAAGGAGAGAGATGGCATCCATTCTTCCTTCACTGTTTCCAGGCCAATCATTTCTAGTGGTAATGGTAGTAGTAGTAATCTGAGTAATGGAAGTAGTAGCAAGAAATTTTCTGGTGAAGATTCCAAACAAGGGAGCCCTAAGGAAGATGGAAGCTCGGATGGGAAGGATAAATCTGGAAGAAAAAAATGGTTTAATCTCAATCTTAGCAGTTCTGGTAAGAGAATGTTTTGA 1308 0.4228 MFWNYKERNDTSYRLVVQKGMGSKMEGTSAPAVRRDPYEVLSVSREASDQEIKTAYRKLALKYHPDKNADNPAASELFKEVAFSYSILSDPEKRRQYDSAGFEALEADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQGAHFFGVTINEQQAESGVVIRATSTAQSKFKLLYFEHDVNGGYGLALQEDSEKAGRVTSAGMYFLHFQVYRLDSTVNALAMAKDPEGAFFKRLEGLQPCEVSQLKPGTHIFAVYGDNFFKTASYTIEALCAKSYEDTTQKLKDIEAKILLKRNELRQFETEYRKALAHYQEVTERYTKEKQEVDELLKERDGIHSSFTVSRPIISSGNGSSSNLSNGSSSKKFSGEDSKQGSPKEDGSSDGKDKSGRKKWFNLNLSSSGKRMF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0343 435 PRINTS DnaJ domain signature 56 71 IPR001623 -
Acco11g0343 435 PRINTS DnaJ domain signature 93 112 IPR001623 -
Acco11g0343 435 PRINTS DnaJ domain signature 38 56 IPR001623 -
Acco11g0343 435 PRINTS DnaJ domain signature 73 93 IPR001623 -
Acco11g0343 435 MobiDBLite consensus disorder prediction 370 398 - -
Acco11g0343 435 MobiDBLite consensus disorder prediction 370 435 - -
Acco11g0343 435 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Acco11g0343 435 SUPERFAMILY Chaperone J-domain 35 106 IPR036869 -
Acco11g0343 435 Gene3D DnaJ domain 22 119 IPR036869 -
Acco11g0343 435 ProSiteProfiles dnaJ domain profile. 36 101 IPR001623 -
Acco11g0343 435 Pfam DnaJ domain 36 98 IPR001623 -
Acco11g0343 435 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 23 432 - -
Acco11g0343 435 SMART dnaj_3 35 93 IPR001623 -
Acco11g0343 435 CDD DnaJ 36 90 IPR001623 -
Acco11g0343 435 FunFam Chaperone protein dnaJ 16 21 118 - -
Acco11g0343 435 Coils Coil 306 361 - -
Acco11g0343 435 MobiDBLite consensus disorder prediction 399 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0343 Acco-ChrAcco11 4742820 4749457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0343 27 108 C2H2 Transcription Factor Family AT1G74250 41.379 7.29e-12 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0343 11 4742820 4749457 Acco11g0343 11 4742820 4749457 ECH