Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0337 ATGGCGGCAACCCTTTACTGTGCTACCTTCTTCTCAATACTTTTCCGTCTTCTTCTTCTTGGTCATAGCTCCGAAAACCCAGACTTTGAAGCTCTCATGGCGTTTAAAACAGCTTCAGATACATTCAACAAACTCTCGTCTTGGAACTCCACCACCGACCCTTGTTCTTCTTGGTCCGGCGTCTATTGCCTCCATAACAGAGTCTCGCGTCTCGTTCTCGAAAACCTCGATCTCCGAGGCTCTTTTGAACCTTTGACTTCTCTGACCCATCTTCGAGTCCTGAGCCTGAAGCGAAACCGCTTCTCCGGCCCCATTCCGAGTCTCTCCAATTTCACCGCCCTTAAACTTTTGTATCTGTCTTACAATGAGTTTTCCGGTGGCCTCCCGGCGACTGTCACGTCGCTTTTCCGCTTGTACCGTCTTGATCTGTCTCACAATAACTTGTCCGGCGAGATTCCCGCCACGGTCAACCACATGACCCACATTCTCACTCTCCGTCTGGACGAGAACCGTTTCTCTGGAAACATTCCCAGTCTTAACCTTCCCAACCTGCAAGACTTCAATGTCTCCGGGAATCGACTCTCCGGCGAAATACCTAAATCACTGTCGGGCTTCCCCGAATCCAGTTTCGGTCTAAACCCGTCTCTCTGCGGAGCACCGATTCAGAAATGCGCCAACTTTGTGGCCGAACGCAGCAAACCCGGATCTGAAGGAGCCATTGCGTCGCCAGTAACGCCGCGAGGTAACCCACGAACACCAACAATAACATCCACACCGAGCTCAATGCCTTCAAACGAAGCAACACCTCCCAGAAAACCCAACTCATCAGCAAAAATAAGCCCCATAGCTCTAATCGCCATAATTCTGGGCGACATTGTGGTTCTCGGAGTGGTCACGCTTCTTCTGTACTGCTACTTCTGGCGAAACTACGCCGCAAAAATGAAAGAAGGAGGAAAAGGGTCGAAGCTAATGGAGACTGAGAAAATCGTTTACTCATCGAGCCCCTACCCGGTTCAATCGGGTTTTGAGAGGGGTCGAATGGTGTTCTTCGAAGGGGTGAAGAAGTTCGAGCTTGAGGATTTGCTCCGAGCGTCGGCTGAAATGCTCGGAAAAGGTGGGTATGGGACGGCGTACAAGGCGGTTCTGGACGACGGCAGCGTCGTCGCCGTCAAGCGGCTGAAGGATGCTCAGATTGGAGGGAAGAAAGAGTTTGAACAACACATGGAAATTCTGGGAAGAATGAGACATCCAAATATTGTTCATTTGAGGGCTTACTATTTTGCCAGGGATGAGAAGTTGCTGGTCTCAGATTACATGCCTAATGGAAGCTTGTTCTGGCTTCTTCATGGGAACCGAGGACCTGGCCGGACCCCACTGGACTGGACCACAAGGCTTAAAATAGCTGCCGGAGCGGCGCGTGGGGTGGCTTTTATTCACAGCTCATGCAAATCCCTTAAACTCACCCATGGTAACATCAAATCCACAAACATCCTCCTCGACAAGGCGGGAAATGCACGCGTGGCAGATTTTGGGCTCTCCATCTTTGCCGGCCCCACCGCCATGGCCGCTCCGAAATCTAACGGCTACCGTGCCCCGGAGGCCTTCGACGGTCGGAGATTCACTCAGAAATCCGACGTCTTCTCCTTTGGCGTTGTCCTGTTGGAGATTCTCACTGGGAAATGCCCCTCAAACGTGGACGGCAGCGGGTGCGGTGGTGGCAGTGCGGTTGTGGATCTTCCGAGGTGGGTACAGTCGGTGGTGAGGGAGGAATGGACGGCGGAGGTCTTCGATCTTGAGCTTATGAGGTACAAGGATATCGAGGATGAGATGGTGGGGCTACTCCAAATTGCTCTGTCGTGTACGGCCGCTGTACCAGATCAGCGGCCCAGCATGAGCCACGTGTTGAAGATGATCGAGGAGATTCGTGGGGTCGACGTGGGGCCCTCTAATGACACGTTGGACTCTGCGTCTGATTCCCCTTCTGTGTCTGAAGATGCTTCTTAA 2004 0.5245 MAATLYCATFFSILFRLLLLGHSSENPDFEALMAFKTASDTFNKLSSWNSTTDPCSSWSGVYCLHNRVSRLVLENLDLRGSFEPLTSLTHLRVLSLKRNRFSGPIPSLSNFTALKLLYLSYNEFSGGLPATVTSLFRLYRLDLSHNNLSGEIPATVNHMTHILTLRLDENRFSGNIPSLNLPNLQDFNVSGNRLSGEIPKSLSGFPESSFGLNPSLCGAPIQKCANFVAERSKPGSEGAIASPVTPRGNPRTPTITSTPSSMPSNEATPPRKPNSSAKISPIALIAIILGDIVVLGVVTLLLYCYFWRNYAAKMKEGGKGSKLMETEKIVYSSSPYPVQSGFERGRMVFFEGVKKFELEDLLRASAEMLGKGGYGTAYKAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEILGRMRHPNIVHLRAYYFARDEKLLVSDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHSSCKSLKLTHGNIKSTNILLDKAGNARVADFGLSIFAGPTAMAAPKSNGYRAPEAFDGRRFTQKSDVFSFGVVLLEILTGKCPSNVDGSGCGGGSAVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEDEMVGLLQIALSCTAAVPDQRPSMSHVLKMIEEIRGVDVGPSNDTLDSASDSPSVSEDAS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0337 667 SUPERFAMILY L domain-like 46 206 - -
Acco11g0337 667 FunFam pollen receptor-like kinase 1 336 438 - -
Acco11g0337 667 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Acco11g0337 667 SUPERFAMILY Protein kinase-like (PK-like) 367 639 IPR011009 -
Acco11g0337 667 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Acco11g0337 667 CDD STKc_IRAK 369 641 - -
Acco11g0337 667 Gene3D Ribonuclease Inhibitor 139 225 IPR032675 -
Acco11g0337 667 MobiDBLite consensus disorder prediction 650 667 - -
Acco11g0337 667 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 439 648 - -
Acco11g0337 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 644 IPR046959 -
Acco11g0337 667 Pfam Protein kinase domain 367 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0337 667 FunFam Nuclear pore complex protein NUP107 25 178 - -
Acco11g0337 667 Gene3D Transferase(Phosphotransferase) domain 1 439 652 - -
Acco11g0337 667 MobiDBLite consensus disorder prediction 646 667 - -
Acco11g0337 667 ProSiteProfiles Protein kinase domain profile. 363 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0337 667 MobiDBLite consensus disorder prediction 247 275 - -
Acco11g0337 667 Gene3D Phosphorylase Kinase; domain 1 340 438 - -
Acco11g0337 667 MobiDBLite consensus disorder prediction 235 276 - -
Acco11g0337 667 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0337 Acco-ChrAcco11 4693595 4696753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0337 28 666 Receptor kinase-like Gene Family AT1G68400 64.877 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco11g0337 Pkinase 4.5e-38 CL0016