Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0336 ATGGCAGTACTCTTGGAATTTTATTTTGGCCTCATCTCTCTTTATCGTAAATTCTCGTCATCCAACTATGCAGAAAATGAGAAATATCCAAAGTCAACCAGTTCAAATAGGTGCTATACTTCTGATGAAAAAGCACACCAAATTGGGATGATTCCACTTTACATGTCTCGCTTCCTCTTGTTTTCTGAACTGTTACTGCTATTTCTAGCTGGACTTGGAAATGGAAACCATGAAAAGTGTCCTCAATCATTTGACTGTGGAGAACTTGGGAAGATCCACTTCCCTTTCACCAAAGCAGAAAGACAGGATTGTGGCTTAATGGTGATACATGGTTGTGATGATCCTCCATCTTTGAATAAAACGATTCAGCTAGAGAAAAATGGAAGGCCATTAAAGCTCACAAGCATCATTCAGCAGAATAACTCTCTTTCTGTTATTGTTACTGATACACATCTTCGAGAGAGGTTGAAATCCAAAACTTGTCAAGTTTTCAACAAGAATATAACTCTTCCTCATGCATCTCCTTTGGTTTCCTTTCATATCAAACACAACATAACCTTGGTCAGATGTGATCACAGATTCAAAATCAGCCCTCCTGCAAATGTTTATAACTATACCTGCCATAACTATAATATCTATCATTACCACTTGCACAAGCTTCCTCTTCTTGATCATTATTACCAAAAAACTTTTTCAGGTTGCTCTGTTCTTCTGCTCCCAAGTAAACACCAGACTCATACCAAAGACCTTTTCTCATTCTTAACTGCTCAAATGGCTATTGAAGTACAATTATCTGATGCTTGTGTCAAGTGTTACAACAACATAGGTGGCCAATGTCGACTAGACAGCAATAGGAACTTCTATTGTGACAAAGAGAAAAGTGAAAAAACCATGCTCATTGCAACAACAGTAGCTTCTTCTATGGGTCTTGCTGTGCTATTATTGTTCCTGGCCTTTTGCTATAGAAGAAAGCTTCTTTCTATTGCTTCATCAAGTCTCTCTTGGAGGAAAAAACTTCAAACTCATCAAATAACTGAAGCCTCTCTGAAGCAACATGGACCAATCTCTTCTAGACAGTACAGTTACTCTGAGATAAAGAAAATCACAGACTGTTTCAAAATCAAATTAGGCAAAGGAGGGTATGGAACTGTATATAAAGGGAAGCTACCAGATAATACCAAGCGTCTTGTTGCAGTGAAAGTGCTAAGTCAACTAAAATGTACTGACGAGGAATTCATTAATGAAGTTGCAAGTATCAGCAGGACATCTCATGTTAACATTGTTGGCCTTCTAGGCTATTGTTTCCAAGGTACCAAAAGAGCTCTAGTTTATGAGTTTATGCCTAATGGATCTCTCGAAAAATTCATATATGAACGCCAATTGGACTGTCAAACTCTGTTTAGTATTGCAGTTGGTGTTGCAAGAGGATTAGACATCTCTGCATTTTCTCTTTCTTTGTATGTATCATCAAGCATAAAAGATTTCAACATTTGCTTTTCTGAATTGACAGATGAAGAGGAACTTTTCTGTGAACTTGAAGCTCTATTTTCTGTTATTTCTGAGAAATGA 1569 0.3735 MAVLLEFYFGLISLYRKFSSSNYAENEKYPKSTSSNRCYTSDEKAHQIGMIPLYMSRFLLFSELLLLFLAGLGNGNHEKCPQSFDCGELGKIHFPFTKAERQDCGLMVIHGCDDPPSLNKTIQLEKNGRPLKLTSIIQQNNSLSVIVTDTHLRERLKSKTCQVFNKNITLPHASPLVSFHIKHNITLVRCDHRFKISPPANVYNYTCHNYNIYHYHLHKLPLLDHYYQKTFSGCSVLLLPSKHQTHTKDLFSFLTAQMAIEVQLSDACVKCYNNIGGQCRLDSNRNFYCDKEKSEKTMLIATTVASSMGLAVLLLFLAFCYRRKLLSIASSSLSWRKKLQTHQITEASLKQHGPISSRQYSYSEIKKITDCFKIKLGKGGYGTVYKGKLPDNTKRLVAVKVLSQLKCTDEEFINEVASISRTSHVNIVGLLGYCFQGTKRALVYEFMPNGSLEKFIYERQLDCQTLFSIAVGVARGLDISAFSLSLYVSSSIKDFNICFSELTDEEELFCELEALFSVISEK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0336 522 ProSitePatterns Protein kinases ATP-binding region signature. 376 400 IPR017441 GO:0005524
Acco11g0336 522 ProSiteProfiles Protein kinase domain profile. 370 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0336 522 FunFam S-receptor-like serine/threonine-protein kinase 338 446 - -
Acco11g0336 522 Pfam Protein tyrosine and serine/threonine kinase 374 478 IPR001245 GO:0004672|GO:0006468
Acco11g0336 522 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 56 478 IPR044652 GO:0004672
Acco11g0336 522 SUPERFAMILY Protein kinase-like (PK-like) 352 478 IPR011009 -
Acco11g0336 522 Gene3D Transferase(Phosphotransferase) domain 1 356 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0336 Acco-ChrAcco11 4674628 4678131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0336 257 478 Receptor kinase-like Gene Family AT5G38260 41.485 5.38e-42 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco11g0336 PK_Tyr_Ser-Thr 4.9e-19 CL0016