Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0322 ATGTCTTCATTATATGTGTCTCATTTCCTCTTGTTTTTTCACTTTGTCCTTGTTCTTCTCTCAATTGGGTATGGAAATGGGAAGCATCATGACAAGTGTCCCACATCGTTTGAGTGTGACCAATTTGGGAGCCTGCACTTCCCTTTCACCAAGCCAGAACTCCAACACTGTGGCTTTATAACAATAAATGGTTGTGATGACCCATCTTCAGATAAAACAATTCAACTGGAGGAGAATGGGAGAACATTACCTCTTACAAATTTGGTCCAGCAGGAGAATCTCATGACAGTTCTTGACCAAGTTCTGCGTCCAACCTGTGAAGTTTTTGACAGAAACGTGTATTTTCCTCTATATTCTCCTTTGGCTTCCTTTCATGTCAAACGCAATGTAACCACCCTGTTCCGATGCAACCACGACGTTACCCCCAGCCCCCCTGCTGGTTTCATCAATCTTATCTGTCCTGAATTCAATATCTTTTGTCCTGACTTAGACTTTCCTCCTCCTCCTCCTCCTCTTCTTGCTCAGCCACAAACATCTTTAACTGGTTGCTCCAGTCTTCAGCTTCCTTGTAAGAACCTGACATATACCCCAAATTTTTCGTTATTCTCATGCGGTGAAATAGATATCGAAGTGCAATTATTTGATGGTTGTGATGAGTGTTACAACCTCAAGGGAGGCCAATGTCTAGTTGACAACCACAATAACTTCTACTGTGACATAGATGCAGAGACTGGGAGTGAGCCATTCAACTTGAAGTGTAAACTTGGCCTCGCAGGTTTATTTATTGGAGCAATAGGATTTGCAATAATAACTTTGTGTCTACTTGAACAGCATTACAAACAACATTCTTCAAGTGTCCAATTGCAAGCAACAAACAATAATGCAATTGATCCCAACTCTGACACTGATCTAGAAAGAGGCAGGTATTTAGGGATCCGCCTCTACTCTTATGAGGAGCTTGAAAAAGCAACAAATAATTTTGACCGTTCAAGAGAACTTAGGAATGGAGGCCTTAGCTCTGTCTACTACGGAAAACTCCAAAATGGACGAGAAGTTGTAATCAAACGTCTAAGTAACAAGAACTATAGACGACTTGAACTGTTTCTAAATGAAGTTGAGATCTTGGCTCGCGTGCGCCATCAAAACCTTGTGTCTATCTATGGCTGCACCTCCCACCACAGTCGTGAACTTCTCCTTGTTTATGAATATGTTCCAAATAGCACAGTTTCATGTCATCTTCACGGTGAGCTAGCCAACCTTGGTTTACTACCATGGCATCTGATATCATCTAAGCCAGCAGTTGATATGAACAGGCCGAAAGAGGAGATAATTCTGGCAAATCTAGCAATAAAGAAGATTCAGAAAAGTGCAATAAAAGAGCTAGTTGATCCTTCTCTTGGTTTTGAGTCAAGTTATGAGGTTAGGAGGATGATAGTTTGTGTGGCAGAGTTGGCTTTTCGGTGTTTACAAGGAGACAAGGAATTGAGACCTTCCATGTATGAGGTTCTGGAGATACTAACAAGAATTGAGAGTGGGAAGGAGGAACTCAATTGTCCAGAAGAAGTGAATAATCATGGGGTAACGGGGACTTTGCATAGTGGTATGAAACATTCACCACCTCCTCCTTCACCAGACAACAATGAGGCTATATTGTTGAAAAATACTTAG 1668 0.4149 MSSLYVSHFLLFFHFVLVLLSIGYGNGKHHDKCPTSFECDQFGSLHFPFTKPELQHCGFITINGCDDPSSDKTIQLEENGRTLPLTNLVQQENLMTVLDQVLRPTCEVFDRNVYFPLYSPLASFHVKRNVTTLFRCNHDVTPSPPAGFINLICPEFNIFCPDLDFPPPPPPLLAQPQTSLTGCSSLQLPCKNLTYTPNFSLFSCGEIDIEVQLFDGCDECYNLKGGQCLVDNHNNFYCDIDAETGSEPFNLKCKLGLAGLFIGAIGFAIITLCLLEQHYKQHSSSVQLQATNNNAIDPNSDTDLERGRYLGIRLYSYEELEKATNNFDRSRELRNGGLSSVYYGKLQNGREVVIKRLSNKNYRRLELFLNEVEILARVRHQNLVSIYGCTSHHSRELLLVYEYVPNSTVSCHLHGELANLGLLPWHLISSKPAVDMNRPKEEIILANLAIKKIQKSAIKELVDPSLGFESSYEVRRMIVCVAELAFRCLQGDKELRPSMYEVLEILTRIESGKEELNCPEEVNNHGVTGTLHSGMKHSPPPPSPDNNEAILLKNT 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0322 555 MobiDBLite consensus disorder prediction 527 555 - -
Acco11g0322 555 Pfam Protein tyrosine and serine/threonine kinase 330 416 IPR001245 GO:0004672|GO:0006468
Acco11g0322 555 Gene3D Phosphorylase Kinase; domain 1 299 403 - -
Acco11g0322 555 Gene3D Transferase(Phosphotransferase) domain 1 419 520 - -
Acco11g0322 555 ProSiteProfiles Protein kinase domain profile. 327 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0322 555 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 426 IPR044652 GO:0004672
Acco11g0322 555 SUPERFAMILY Protein kinase-like (PK-like) 302 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0322 Acco-ChrAcco11 4463114 4466353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0322 416 554 Receptor kinase-like Gene Family AT1G25390 42.857 9.60e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco11g0322 PK_Tyr_Ser-Thr 4.1e-10 CL0016