Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0316 ATGAACCCAGCCACCCCCTTCTTCATCCTCGTCTTGTGGGTTCTCATCAGAACTACCCTCTGTGATGTGAATCCGAAGTTCCAAGCTTGCGAGCCCCGAACATGTGGAAACGGCCCTACCATAACCTACCCCTTTTATATCCAAGATAAGCAAGACCCCTCCTGCGGTTTCCCTGTTTTCGGCCTTGTCTGTGCTTCTAATGGCTTCCCACTGCTCAATCTCTCCAATACTCTCTACATCGTCGATGAAATTTTCTACGACAATCAATCTCTTCGAGTCTCCAACCCTAACTTTCCGATATCCAATTCCACCAATTGTCTCTCCCCCCTCAACAACCTCACTCTCGATTACCGGTATACTTTAGTTCCGAACCAGAAGGAGGTGCGACTGTTCTTCGGTTGTGATTTACCGTCGTTGCCGGAGGAGGTTAAAGAGAACGTATGGGGGTGTTATGAAGGGAACCGAACAAAGTCGGTGTTGGGTATGGCGGTGGACGATGAAGCGAAGAAGTTGAAGTATGCGAATGATAATTGCGGTGGTGGGTCGATGACGACGGTGGTGGAGAATTTGGAAGGAGGGATCAGAGAGGCTTTGGGAAGAGGATTCTTGTTGAAGTCTCCGAATTGGACGGCGAGTGAGTGCGACAAATGCCAGAGCAGTGGAGGAAGGTGCGGTTTCGTCGACACTGATGGATTTGGCTTCAGGTGCTTTTGCCGCGACGGCATCCAAGTTACGAGGTGTCATTCTGGTGCAGGCAAACGGGCTTTGAAACTGGGACTGGGATTAGGTTTAGGGATTGGAGTCCCATGGATGATAACAATGGGGATGATTGTGTGGTGGTGGAGGAGAAGAAAATATGGAGATTCAGATTCAATAAACAGATATGGTGGTCATTCGAACATGGAGGGTAGCAATGTGTACTTTGGAATCCCTGTTTTCTCCTACGCCGAGCTTGAAGCAGCCACCAACAATTTTGACCCTTCCACTGAACTTGGAGATGGAGGCTTTGGCACTGTTTATTACGGCAAACTAGAAGACGGACGAGAAGTTGCAGTCAAACGCTTATATGAGCAAAACTACAAACAAGTAGAACACTTCATGAATGAAGTGAAAATCCTAACTCGCTTACACCACAAAAACCTTGTCTCCCTCTATGGCTGCACCTCCCGCCACAGCCGCGAACTCATCCTCGTCTACGAATTCATCCCAAACGGAACTGTCGCTCATCACCTCCACCTTCATAGAGATCCCAAAAGGCCCACCGTCCTACCTTGGTCCACCCGCATGAAGATCGCTGTCCAAACGGCAAGAGCATTGGTCTACCTCCATGCTTCTGACATCATCCACCGCGACATCAAAACCAACAACATCCTCCTCGACGAAGGATTCAACGTTAAGGTTGCTGATTTTGGACTTTCAAGGTCTTTCCCCTCCGATGTCACCCATGTTTCCACTGCTCCTCAGGGGACACCGGGTTATCTCGACCCCGAATATCACCATTGCTACCAGCTCACTAGCAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTATCGAACTCATAACATCCATGGCCGCGGTTGACATGAGCCGGGACTCAGACTCTATTAACTTGTCGAGCTTAGCCGTGAGGAAGATCCAGAGGAGCGAGCTGAGCGAGCTGGTGGATCCTTCTCTTGGGTTTGGGAGTGATGGGGAAGTGAAGAGGATGGTGATTTTAGTGGCTCAGTTGGCGTTTCAGTGTTTACAAACTAATAAGGAGTTCAGACCTTCCATGGAGGAAGTTTTGGAGACGCTGGAGAGGATTCAAAGTGGCAGTGATGGGAGTGATCGGGTACAGAAGCCCCCATGGTTGCCGCCGGAATCACCCAATCGGGATGAGGTTGGGTTGTTGAAGAACACAAATCCATCACCTCGTTCTCCTAACAGTGTTGCTGATAAATGGGGAAGCCAATCCACAACGCCCAACGTTAGTACTTTGAGCAAGTGTTCATATTAG 1998 0.4905 MNPATPFFILVLWVLIRTTLCDVNPKFQACEPRTCGNGPTITYPFYIQDKQDPSCGFPVFGLVCASNGFPLLNLSNTLYIVDEIFYDNQSLRVSNPNFPISNSTNCLSPLNNLTLDYRYTLVPNQKEVRLFFGCDLPSLPEEVKENVWGCYEGNRTKSVLGMAVDDEAKKLKYANDNCGGGSMTTVVENLEGGIREALGRGFLLKSPNWTASECDKCQSSGGRCGFVDTDGFGFRCFCRDGIQVTRCHSGAGKRALKLGLGLGLGIGVPWMITMGMIVWWWRRRKYGDSDSINRYGGHSNMEGSNVYFGIPVFSYAELEAATNNFDPSTELGDGGFGTVYYGKLEDGREVAVKRLYEQNYKQVEHFMNEVKILTRLHHKNLVSLYGCTSRHSRELILVYEFIPNGTVAHHLHLHRDPKRPTVLPWSTRMKIAVQTARALVYLHASDIIHRDIKTNNILLDEGFNVKVADFGLSRSFPSDVTHVSTAPQGTPGYLDPEYHHCYQLTSKSDVYSFGVVLIELITSMAAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLGFGSDGEVKRMVILVAQLAFQCLQTNKEFRPSMEEVLETLERIQSGSDGSDRVQKPPWLPPESPNRDEVGLLKNTNPSPRSPNSVADKWGSQSTTPNVSTLSKCSY 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0316 665 MobiDBLite consensus disorder prediction 628 665 - -
Acco11g0316 665 Gene3D Transferase(Phosphotransferase) domain 1 402 616 - -
Acco11g0316 665 FunFam receptor-like protein kinase FERONIA 291 401 - -
Acco11g0316 665 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Acco11g0316 665 Gene3D Phosphorylase Kinase; domain 1 299 401 - -
Acco11g0316 665 FunFam Wall-associated receptor kinase-like 20 402 611 - -
Acco11g0316 665 Pfam Wall-associated receptor kinase C-terminal 153 241 IPR032872 -
Acco11g0316 665 MobiDBLite consensus disorder prediction 602 665 - -
Acco11g0316 665 CDD STKc_IRAK 331 602 - -
Acco11g0316 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Acco11g0316 665 Pfam Protein tyrosine and serine/threonine kinase 329 599 IPR001245 GO:0004672|GO:0006468
Acco11g0316 665 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 652 IPR044652 GO:0004672
Acco11g0316 665 Pfam Wall-associated receptor kinase galacturonan-binding 30 94 IPR025287 GO:0030247
Acco11g0316 665 ProSiteProfiles Protein kinase domain profile. 325 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0316 665 SMART serkin_6 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0316 665 SUPERFAMILY Protein kinase-like (PK-like) 310 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0316 Acco-ChrAcco11 4410757 4419612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0316 214 658 Receptor kinase-like Gene Family AT1G25390 55.357 2.08e-160 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco11g0316 PK_Tyr_Ser-Thr 2.3e-48 CL0016