LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco11g0306	ATGGTTTGTCAACAAGAAGGAAGGTTCAAACTTGTGATGGCTAAAGCCAACATGCCTGACATGAGCGCCATTTCTTTTCTCAATACACTTCTTCTCAAGCATATCACTGTCATCTTTATATGCTCTGGACAGAATGATGGTGGAGCAAGGGAGGCTTTTGATAGAGGATATTGTTATCTCCTAAAGGAACCAATCCAATCAGAGCATCTAATATCTTTGTGGCAACAAGTCTATAACTCAAATAATAGCAACTTAGCACAAGAGATTCACTCTGCAAAATCTAAACAAAAGGTGAATGGATCAAGTGAAGAACAAGAACAAGATAATACTCATAATGACGTGAGGGTCAAGAAAAAAGGGAAGAGAACATATAACTCAAACCATGTGAAATTAGACAACAATAACAATCATCATGATGCAGAAATGGAGGGAGAGGAAACGAGAGAGCAGAACGACAAAATTCGTCCAAAATTGATACAAGAGATCATGAATGTTCCTTACCTGACATGTCGCCATATTGCTAGCCATCTCCAGAAATTCAAATCTGAAGTAAGGCGTCTTCAGGATAAGTGTAAATCATCAAACTTCAGGCATGGAACCAAGTCATCCTCATCAATACAGAGCCAGTGTCACCCAGGTTACGATCCCACATCAGCTGCTTTCCAAAACCATTTTCCAGTGAGCTTTTCTGGAACCGAAGATCTAGAAGCTGTAGTGAGAGGAGCTGTGCCAGATGCTTTAATGGATAAAAACCAGTATGATGACTTTGGAAATGGATTCACTGAAGATGATAGTTCCCAAAACTCTGAGATACAAACTAATCCTATCTTCGGAAACAGTTCTTGTTCACAGAAGTCTAATAGCAGTAAACCTTGCTGTATCAAGCCATCTGCTATATTATTAAGAGAACTTGGGCCATGTGCTTCAATGAATCAAAGCGAAACCCTAACTGAAGATAAAAACATATTAAGAATTCTTGGAGGAGATAGTGAAGGATATGACTGTTTTAGGGGTCCAGATCATATAACCCAAAATTCTGAGATACAAAGTAGTTGTATCCATGGGTACAATACCTTAGATAGTTGCAATCCTAGCTCTGCATATGAGAGAGGACATGAATTAACTGATCAAAATAATACCCTGACAGAACATGACAGTGTCTTGAGATTTGTTGGAGGAGGAGATGATTGTTTTGGTAAGGGACCATGTTCACAAAACTCTGAGATGCTGAGAAATTCAGTCCTTGGTTACAACTTTGGTCAACAGAAGTCTGATAACTACAACCCTAGTTGTGATAGACTTTTGAAGTCCAAGGTTGATGCTTTGAAGAATCAAAATCAAAATTTAACAGAAAATGATAATATTGCCCAAAACTCTAAGACGCTAAGGAATTCTGTCTCTGGAAACAGCTCTAGTTCGCCGCAGTCCGATGCATATAGCTGTTTTGGAAATGCACCCAGTTCAGATGATATTGTGATGCTCAAGTCTCTGACAGGAGCTTCATGTCAGAACTGTACTTGGATGGATTCTGGAGTTTATGGTGACCTTTGA	1551	0.3914	MVCQQEGRFKLVMAKANMPDMSAISFLNTLLLKHITVIFICSGQNDGGAREAFDRGYCYLLKEPIQSEHLISLWQQVYNSNNSNLAQEIHSAKSKQKVNGSSEEQEQDNTHNDVRVKKKGKRTYNSNHVKLDNNNNHHDAEMEGEETREQNDKIRPKLIQEIMNVPYLTCRHIASHLQKFKSEVRRLQDKCKSSNFRHGTKSSSSIQSQCHPGYDPTSAAFQNHFPVSFSGTEDLEAVVRGAVPDALMDKNQYDDFGNGFTEDDSSQNSEIQTNPIFGNSSCSQKSNSSKPCCIKPSAILLRELGPCASMNQSETLTEDKNILRILGGDSEGYDCFRGPDHITQNSEIQSSCIHGYNTLDSCNPSSAYERGHELTDQNNTLTEHDSVLRFVGGGDDCFGKGPCSQNSEMLRNSVLGYNFGQQKSDNYNPSCDRLLKSKVDALKNQNQNLTENDNIAQNSKTLRNSVSGNSSSSPQSDAYSCFGNAPSSDDIVMLKSLTGASCQNCTWMDSGVYGDL	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco11g0306	516	PANTHER	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	156	474	IPR044841	GO:0003700\|GO:0006355
	Acco11g0306	516	Gene3D	-	134	188	-	-
	Acco11g0306	516	ProSiteProfiles	Response regulatory domain profile.	1	78	IPR001789	GO:0000160
	Acco11g0306	516	MobiDBLite	consensus disorder prediction	132	152	-	-
	Acco11g0306	516	Coils	Coil	432	459	-	-
	Acco11g0306	516	MobiDBLite	consensus disorder prediction	95	152	-	-
	Acco11g0306	516	SUPERFAMILY	CheY-like	5	79	IPR011006	-
	Acco11g0306	516	MobiDBLite	consensus disorder prediction	97	115	-	-
	Acco11g0306	516	MobiDBLite	consensus disorder prediction	259	290	-	-
	Acco11g0306	516	Gene3D	-	2	114	-	-
	Acco11g0306	516	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	151	182	IPR006447	GO:0003677

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco11g0306	1	189	Response Regulator Gene Family	AT4G31920	25.500	2.63e-10	60.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Acco11g0306		None	None	None