Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0302 ATGGAGCATCGAGCTTTCGTTTTGGTTCCTCTTCCCACTCTTCTTCTTTTCCTCTCTCTCTCCTCCAAAGGGGGCGGCACCACCGAGGAAAATCCTCCATTGCCACCCATGGAGGCGCCTCCTCCTCCGCTCACTGCCCCGCCTCTCTCCGCCGTCGTCACGCCGACGATGCCACCCTCTCATCTCAACTACCCTGACTCTGTTGATTCTTCTCCTCGTTCCCGCAACGCCGACTCCTGGGATGACCCTTTCCCTCCCGCCGCTGCCTCCTCCAAGCTCCGCCTCATGTGCAGCTACGGCGGTCACATCGTTCCTCGCCCTCATGACAAGTCTCTATGTTATGTTGGTGGCGATACTCGTATCGTTGTCGTTGACCGGAACACCTCTCTCTCCGACTTGTCTTCGCGCCTCTCTAAAACCTTCCTTGATGGCCATCCCTTCACTCTCAAATACCAGCTTCCTAGTGAAGACCTCGATTCATTAATTTCTGTCACTACTGATGAAGATTTTGATAATATGATCGATGAGTATGATCGAACTGCTTCGAATTCGTCGGTTAAGCCCTCCAGAATCCGCCTCTTCTTGTTCCCGACGATGCCTGAATCGCCGCAGTCGATTGGGCCTATACTTGATAATTCGGCTAAATCGGATGACTGGTTCCTGAACGCGCTAAACGGCACAGGAGTGATCAACAGAGGGTTTTCGGAGTCCGGTTCTGTAAATTGCTTGCTGGGTCTCGATGATGAGGCTGGTGGGAATAACCTGGACTCGGTTTCTAGGGAAAATGAAGTTGCTCAACAATCTGGATCTTTTGGTAATGGCAAGATTATGACGAAGCAAGGCCAGGACGTTCATTCTGTGACTGATTCGCCTATGCTGGAAACGACCTCGTCTTTTGGGTCTACTTCTTCGTCACCTTCGCTGGCGAATTTGCCACCGATTCGGGTTCATGTGGTGGATGATAGTAGTGTTAGGGTGCAAGATCAGAAGGCAGTCGGAATTGAGGATCAGTTTGCTCAAATGGGTGTTACTGGTGGTGGTGGACAGAGGCAAGATGAGGGGTTTGTCGTTCTGTCTTCTCCTCCTCCGATGCCGGCGAGTATCGCAGGCCCGGTGGCTGTGCCGATTAGCTCCGCCGTTGTTTCTGCCGGGGATTACCAGAATCGGGTTTTCGCGGACGATGAGAGATCAGACCACGGAGTGCCTGTGGGTTACAGAAAACCGATGACACAGCAGCCACAACCACAGTCTCAGGCGCAGCCTCAAAATCTGCCTCCTCAATTTCAACAGAAGTCAGCCGGCGTTGTTGACTTGCCTTCTCCAGATTCAGTTTCAAGTGATGGTAGTGTTTCTAATCCATTGTCACGCCCAAAGCCTGTAATCTATCAAGAACAAGTTCAAATTCCCGCTGTGACTGCAAGGTTTCCTAGTAATCCTACTGATCCAGTAAAGCTTAATATGTCTGATCCTCACGCTCGGATCCAGATACAGCAACAGGTGCAGGACCCTGGATACGTATTGCAACCACAATTTGATCCGCAGCAACAACCTCAACAACAGCAGAAGCAGCAATACATACCAAATTCCCATTTCATTCACCATACTCCTGCTGGAGCCATGCCTATCCCAGCGTATTATCCTGTATATCCTTCCCAGCAACAATCTCACCCTCAGCATCACCCTCAGCTCGATCAGCAATACCCAGTTTACTACATGCCAGCAAGACAGGCACATGCTTACAACTTATCGATGCAGCAGCAGCAGCAGCAGCAACAACAACCTAATATTGGTGAAACCAACATGGCCATTCCTTCTAGCCGACCCCAAGCTCAGCCAAATCCGACAATGGCTCCATCATCTGCAGCTTACAATCCTGTAAGAAATGTTCCCATTCCGAAGGCTGAAATGGCTGCTGGCGCATACAGGACAAGTGCAGGCATCCCCCAATTAGTTCAAGTCCCTTCTAGTCAGCCTCAGTCTCAGCACCAGCAACAATTTGTTGCTTACTCTCAAATTCATCATCCCTCTCAGACTGCTGCCCCTAATTCTGCTGCCCCGGCAAACTATGCTGCTTATGACTACGCTGATCCAGCTCATGCTCAGATATACTACACCCAACATTTGGCTCCTACCATGCCTTCACAGTACCAGACCATGGCAGCTCCACCTGTTGTGCTGCCAGAAGTTTCTTCTCAGCTTCCTTCTGATAGCATTAAGCTGCAGATAAGGACCTCACAGCCAATATAA 2247 0.5051 MEHRAFVLVPLPTLLLFLSLSSKGGGTTEENPPLPPMEAPPPPLTAPPLSAVVTPTMPPSHLNYPDSVDSSPRSRNADSWDDPFPPAAASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDLSSRLSKTFLDGHPFTLKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSSVKPSRIRLFLFPTMPESPQSIGPILDNSAKSDDWFLNALNGTGVINRGFSESGSVNCLLGLDDEAGGNNLDSVSRENEVAQQSGSFGNGKIMTKQGQDVHSVTDSPMLETTSSFGSTSSSPSLANLPPIRVHVVDDSSVRVQDQKAVGIEDQFAQMGVTGGGGQRQDEGFVVLSSPPPMPASIAGPVAVPISSAVVSAGDYQNRVFADDERSDHGVPVGYRKPMTQQPQPQSQAQPQNLPPQFQQKSAGVVDLPSPDSVSSDGSVSNPLSRPKPVIYQEQVQIPAVTARFPSNPTDPVKLNMSDPHARIQIQQQVQDPGYVLQPQFDPQQQPQQQQKQQYIPNSHFIHHTPAGAMPIPAYYPVYPSQQQSHPQHHPQLDQQYPVYYMPARQAHAYNLSMQQQQQQQQQPNIGETNMAIPSSRPQAQPNPTMAPSSAAYNPVRNVPIPKAEMAAGAYRTSAGIPQLVQVPSSQPQSQHQQQFVAYSQIHHPSQTAAPNSAAPANYAAYDYADPAHAQIYYTQHLAPTMPSQYQTMAAPPVVLPEVSSQLPSDSIKLQIRTSQPI 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0302 748 MobiDBLite consensus disorder prediction 56 74 - -
Acco11g0302 748 SMART PB1_new 107 198 IPR000270 GO:0005515
Acco11g0302 748 MobiDBLite consensus disorder prediction 33 54 - -
Acco11g0302 748 CDD PB1_UP2 96 196 - -
Acco11g0302 748 Gene3D - 112 196 - -
Acco11g0302 748 ProSiteProfiles PB1 domain profile. 92 198 IPR000270 GO:0005515
Acco11g0302 748 PANTHER OS05G0427100 PROTEIN-RELATED 63 592 - -
Acco11g0302 748 MobiDBLite consensus disorder prediction 409 436 - -
Acco11g0302 748 Pfam PB1 domain 108 197 IPR000270 GO:0005515
Acco11g0302 748 MobiDBLite consensus disorder prediction 585 618 - -
Acco11g0302 748 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 112 198 - -
Acco11g0302 748 SUPERFAMILY CAD & PB1 domains 108 204 - -
Acco11g0302 748 MobiDBLite consensus disorder prediction 442 458 - -
Acco11g0302 748 MobiDBLite consensus disorder prediction 23 83 - -
Acco11g0302 748 MobiDBLite consensus disorder prediction 390 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0302 Acco-ChrAcco11 4237322 4239884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0302 92 241 MAP Kinase Kinase Kinase AT3G46920 40.523 2.86e-27 117