Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0297 ATGGGATTGCAGAACCAACTAAACGACGTCGCTTCAGATTCGATTCCTCTATTTTTCTTGGCTCTCGTCGCCGATTGCCTCAACCAGCTCCGCTCCTTCATTATCACTCTCCTTCACTCGCTCGGACTCTCCAGATTTGACCCGAACCCGGTCGTTGTTGACGATGGATTTTTCACCGCCGTCGGATCGGGCCTTGCCAGCTTAATCGTCCTCTCCGAGCAGCTCAATCTTAATCGCCGCGTCTCCTATAGATACTCCGTTGTAGGTGGTGGCGATGATGGTCCCGCCGGTGTGATTGGATCTCCCAAGTGTGTGGTGTGTCAGAGCACGTTCGAAGACGGCGACCAAGTTCGACGGCTTCCGTGCCGCCATGTTTTTCACCGGTGCTGCTTCGATGGCTGGCTGGACCACCTTAATTTCAACTGCCCTCTCTGTCGAACACCGCTGGTGTCCGACGAGCGCGTGGCCCTTGCCCAGCGGCGTGTCGGCCCGGAGCTTGTTTCCTTCTCTTTGCGGTGA 519 0.5626 MGLQNQLNDVASDSIPLFFLALVADCLNQLRSFIITLLHSLGLSRFDPNPVVVDDGFFTAVGSGLASLIVLSEQLNLNRRVSYRYSVVGGGDDGPAGVIGSPKCVVCQSTFEDGDQVRRLPCRHVFHRCCFDGWLDHLNFNCPLCRTPLVSDERVALAQRRVGPELVSFSLR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0297 172 SMART ring_2 104 145 IPR001841 -
Acco11g0297 172 SUPERFAMILY RING/U-box 103 152 - -
Acco11g0297 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 155 IPR013083 -
Acco11g0297 172 Pfam Ring finger domain 103 146 IPR001841 -
Acco11g0297 172 CDD RING-H2_RHA2B 104 148 - -
Acco11g0297 172 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Acco11g0297 172 PANTHER RING ZINC FINGER PROTEIN-RELATED 79 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0297 Acco-ChrAcco11 4206215 4206733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0297 1 171 C3H Transcription Factor Family AT1G15100 50.000 6.38e-46 146