Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0266 ATGGTGGCTTTTGGCGGGAAAAAGTTGCGCCAAATGGTTTCAGGCTTGGGCGGTAACAGTCTTGGTCAGGTCCTTGCCGCTGTGGCAGTGACCGTCCTTGTCCGCTTCTTCTCTGGTCCCGGTCCTGTGCTCCCCCCAGAAGCCGAGGATGTGGACCACGGCGATGGGGAGGAGAAGGATGACTCTGATGAGAGTGGAGGTCCCGTTTCCGGTAAAGTTTTCCCGGTCTCAATCCGATGGCGCAACATCTCCTGCTCTCTTTCAGATAAATCCTCCAAGTCTGTGAGATTTTTGCTCAAAAATGTGAGCGGAGATGCAAAGCCGGGAAGGTTATTAGCTATAATGGGCCCGTCGGGTTCTGGAAAAACTACATTGCTCAATGTTCTTGCGGGTCAGCTAGCAGCATCTCCCCGGCTGCTTCTGTCAGGCCTTTTGGAGTTCAATGGCAAGCCTAGCTCAAAGAGAAGTTATAAGTTTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCACAGCTCACAGTGAGAGAGACGTTGTCCCTTGCTACAGAACTGCAGCTTCCTGGCATATCTTCCGTCGAAGAGAGGGATGAATATGTGAAAAATCTCTTGTTCAAACTAGGATTGGTCAGCTGTGCTGATACCATTGTTGGTGATGCAAAAGTTCGGGGAATTAGTGGTGGTGAGAAGAAACGCTTATCTTTGGCATGTGAGCTTCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCAACTACTGGACTCGATGCCTTTCAAGCTGAGAAAGTGGTGGAAACTCTCCAACAACTCGCACAAGATGGTCATACAGTAATTTGCTCTATTCACCAGCCAAGAGGTTCAGTGTATAATAAATTTGATGACATTGTCTTGCTAACTGAGGGTTCACTCGTTTATTCTGGTCCTGCTCGTGATGAACCATTGGCATACTTCTCAAAATTTGGGTATCATTGCCCTGATCATGTGAATCCTGCTGAATTTTTGGCCGATCTAATATCCATCGACTACAGTTCTGCTGAAAGTGTTTATTCCTCTCAAAAGAGAATTGATAGTCTTGTTAGGTCATTCTCTGAAAGCCTTTCTCCAATAATATATGCAACTCCAATTGCCAAAGAAGTGCTTCACAAAAATGGAAAGAGAGTTGGGATGAGAACTGTAGCTAAGAAGAAACGAGGTTGGTGGAAACAATTCTGGATGCTCCTCAGGCGGGCATGGATGCAGGCTTCCCGTGATGGACCAACCAACAAAGTTCGAGCAAGGATGTCTATTGCATCAGCAGTTATTTTTGGTTCAGTTTTCTGGAGAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTCGCTGCAATAAACACAGCTATGGCTGCTCTTACAAAGACTGTTGGGGTGTTTCCAAAAGAGCGTGCAATTGTAGATAGAGAACGTGCAAAAGGCTCCTATTCATTGGGTCCTTATCTGTTCTCGAAATTGTTGGCTGAGATTCCTATCGGAGCAGTTTTTCCACTGATGTTTGGTGCTGTTTTGTACCCTATGGCCCGTCTTCATCCTACTTTACTGAGATTTGGGAAATTCTGTGGGATAGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGGGCTATGGTTCCAACCACTGAAGCAGCCATGGCTGTTGGCCCCTCTCTTATGACTGTTTTTATTGTATTTGGAGGCTATTATGTCAATCCTGAAAATACTCCAATCGTCTTCCGCTGGATTCCTCGTGTTTCTCTCATTAGATGGGCCTTTCAAGGACTCTGCATCAATGAATTTAGTGGTCTTGAATTTGAACATCAGAACCCATTTGATGTTCAAACAGGAGAACAGGCACTGGAGCGCATATCTTTTGGAGGAAGCAAAATTAGGGATACAGTGGTGGCACAAAGTAAGATATTGTTATTTTGGTACTGCACCACCTACCTTCTCCTTGAGAAGAACAAGCCAAAGTACCAGCAACTTGAGCCACCACCTGCACTCAAATCACATTCAAAACTCGAGGAGATTAATCCTGAACAAGATAATCAGCCACCACCCCTTGAAGATCAACCAGTGAATGAGGTTGATGGTTCAAATCAATCTGATCCTGTTGAATCTTTCATCCTAGAAGGTGCTGAGTAA 2178 0.4527 MVAFGGKKLRQMVSGLGGNSLGQVLAAVAVTVLVRFFSGPGPVLPPEAEDVDHGDGEEKDDSDESGGPVSGKVFPVSIRWRNISCSLSDKSSKSVRFLLKNVSGDAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLLLSGLLEFNGKPSSKRSYKFAYVRQEDLFFSQLTVRETLSLATELQLPGISSVEERDEYVKNLLFKLGLVSCADTIVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYSGPARDEPLAYFSKFGYHCPDHVNPAEFLADLISIDYSSAESVYSSQKRIDSLVRSFSESLSPIIYATPIAKEVLHKNGKRVGMRTVAKKKRGWWKQFWMLLRRAWMQASRDGPTNKVRARMSIASAVIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAVFPLMFGAVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIVFRWIPRVSLIRWAFQGLCINEFSGLEFEHQNPFDVQTGEQALERISFGGSKIRDTVVAQSKILLFWYCTTYLLLEKNKPKYQQLEPPPALKSHSKLEEINPEQDNQPPPLEDQPVNEVDGSNQSDPVESFILEGAE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0266 725 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Acco11g0266 725 Pfam ABC-2 type transporter 281 338 IPR043926 GO:0140359
Acco11g0266 725 CDD ABCG_EPDR 75 306 - -
Acco11g0266 725 Gene3D - 75 313 IPR027417 -
Acco11g0266 725 Pfam ABC-2 type transporter 401 611 IPR013525 GO:0016020|GO:0140359
Acco11g0266 725 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Acco11g0266 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 310 IPR027417 -
Acco11g0266 725 MobiDBLite consensus disorder prediction 44 73 - -
Acco11g0266 725 MobiDBLite consensus disorder prediction 673 725 - -
Acco11g0266 725 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 65 628 - -
Acco11g0266 725 FunFam ABC transporter G family member 7 76 314 - -
Acco11g0266 725 SMART AAA_5 108 301 IPR003593 GO:0016887
Acco11g0266 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 324 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0266 Acco-ChrAcco11 3786831 3792413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0266 98 306 Calmodulin-binding Proteins AT2G36910 27.982 2.23e-10 62.4