Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0247 ATGTTATTATCTCATCGATATTCTAAAGTTACAACAACAATATTATTTTTTGTTTCTCAAATATGGTTGACGGCGAATTCATTTTCAGAAGAAGATGAAATATACAGCTTGCCGGGACAACCTCCGGCAGAATTCCGGCAATATGGCGGTTATATTACAGTTGACGAAGAGAATCAAAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGGAGACCACATGTCCAAGCCTCTTGTTCTCTGGTTGGAGGGAGGGCCTGGTGCTTCTTCCGTTGGATCTGGAGCTTTCGTGGAACATGGTCCTTTCATGTTGAGTGAAAACGCTCTTGTGAAAAATGATTATAGTTGGAACAAAGAGGCAAATATGCTTTACTTGGAATCCCCAGCTGGAGTTGGTTTCTCTTACTCTTCTAATCAATCTTTCTATGGCTCTGTCAACGATGAAATTACAGCGAGGGATAATCTTGTCTTCCTACAGCGTTGGTTTAATAAATTTCCAGAATACAAGAACAATGTTTTCTTTATTGCTGGAGAGAGCTATGGAGGTCACTTTGTCCCTCAACTAGCACAACTCATCAGTGACACCAAGACCCAGTTCAATCTCAGAGGGATTGCAATAGGGAATCCACTTCTAGAATTTAGTACTGATCTCAACTCAGTAGGAGAATTTTTGTGGTCCCGTGGGATGATATCAGATTCAACTCTCCAAAGCTTGACCTCAGCATGCAACTTTTCCCAAATAACGAGGCAAAATCTAAGTAAAACTCTCACACCGGTTTGCAAAGCAGTGGCTACACAGATGTTACAAGAGGTTGGTGTGGATTTTACTCCAGTTGATATCTCTCCATGCTTGTCCACCTCAACAATCTCTGAAGTTAGCCAACTGCCTAAGAAGATTCAAGAAATAGAGAATTACTTAAACCGGCAAGATGTACAAGAAGCTCTTCATGCTAAGCTTATAGGAGTCACCAAGTGGTCCATTGACAGTGAAGTTGTAAAATATGATATTCAGAGTGCTGAGATTCCAATAATTCCTATCCTCAAGAAACTAGTTGAGTCAGGTCTCCAAGTACTGGTATACAGTGGAGATCAAGATGCAGTGATTCCCCTAACTGGAACACGAATGCTGGTGGATGAATTAGCCAAGGAGATGGCACTGAATCCAACTGTCCCCTATAGAAGATGGTTTCAGGGAAGACAGGTTGCAGGATGGACACAGGTGTATGGTAACAACATTCTATCATTCGTAACAATAAGAGGAGGAGCTCATTTGACATCATTTTCACAGCCTGAAAGATATTTGCTGGTGATTCAAGCTTTTCTGCAAGGAAAGCCACTTCTCCATAAATAA 1350 0.4104 MLLSHRYSKVTTTILFFVSQIWLTANSFSEEDEIYSLPGQPPAEFRQYGGYITVDEENQRALFYYFVEAEGDHMSKPLVLWLEGGPGASSVGSGAFVEHGPFMLSENALVKNDYSWNKEANMLYLESPAGVGFSYSSNQSFYGSVNDEITARDNLVFLQRWFNKFPEYKNNVFFIAGESYGGHFVPQLAQLISDTKTQFNLRGIAIGNPLLEFSTDLNSVGEFLWSRGMISDSTLQSLTSACNFSQITRQNLSKTLTPVCKAVATQMLQEVGVDFTPVDISPCLSTSTISEVSQLPKKIQEIENYLNRQDVQEALHAKLIGVTKWSIDSEVVKYDIQSAEIPIIPILKKLVESGLQVLVYSGDQDAVIPLTGTRMLVDELAKEMALNPTVPYRRWFQGRQVAGWTQVYGNNILSFVTIRGGAHLTSFSQPERYLLVIQAFLQGKPLLHK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0247 449 Gene3D alpha/beta hydrolase 27 447 IPR029058 -
Acco11g0247 449 Pfam Serine carboxypeptidase 39 443 IPR001563 GO:0004185|GO:0006508
Acco11g0247 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Acco11g0247 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Acco11g0247 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Acco11g0247 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 413 426 IPR001563 GO:0004185|GO:0006508
Acco11g0247 449 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Acco11g0247 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 428 IPR001563 GO:0004185|GO:0006508
Acco11g0247 449 FunFam Carboxypeptidase 27 447 - -
Acco11g0247 449 SUPERFAMILY alpha/beta-Hydrolases 35 446 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0247 Acco-ChrAcco11 3669726 3674448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0247 305 446 Calmodulin-binding Proteins AT2G22960 28.169 5.07e-13 65.9