Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0208 ATGGCTAGCAGTAATGTTGAGGAGATTATCGCAAATATGGAGGAAGGTGAAACTAAAACCTCAAAAGGATCTGGTTTTTGTGGTTCTTCTTCCACAGTTCAAATCATACAGAAGGTAATTGCAGAGGTAATAGGGACATACCTGGTGATCTTTGCAGGGTGTTGTTCAGTGGTTTTGAATAATCTAGATGGGAAAGTAACATTTCCTGGAATCTGTCTAACTTGGGGCTTAATAGTAATGATAATGGTTTACACGGTGGGGCACATCTCCGGCGGACACTTTAATCCGGCAGTGACGGTGGCTTTCACTATATTCCGGCACTTTCCATGGAAGCAGGTACCACTGTACATAATAGCACAGGTGGTGGGATCCATACTGGCGAGTGGGTCGCTGTACATGTTGTTTGAGGTAAACGACAAGTCGTATTTTGGGACGTTGCCGGCGGGATCAAACGTTCAGTCGCTTATAATGGAGATCATTGCTTCTTTCTTGTTGATGTTCGTCGTTTCTGCTGTTGCCACTGACAATAGAGCTATCGGAGAATTGGCAGGAATTGCAGTTGGGATGACGATTACTGTGGATGTCTTCATTGCAGGGCCGATATCAGGAGCATCAATGAACCCAGCAAGGAGTATTGGGCCAGCAATAGTGATGCATCAATATAAGTCAATATGGGTTTATATGGTGGGCCCATTTATTGGAACTATTCTTGGTGGGCTTGCCTATAGCCTTATTAGATTCACTGATAAGCCTCTCCGAGAACTCACAAAATCTCCTCTCTTTAAAGCCTCCTCCTCCCACTCCTAG 807 0.4461 MASSNVEEIIANMEEGETKTSKGSGFCGSSSTVQIIQKVIAEVIGTYLVIFAGCCSVVLNNLDGKVTFPGICLTWGLIVMIMVYTVGHISGGHFNPAVTVAFTIFRHFPWKQVPLYIIAQVVGSILASGSLYMLFEVNDKSYFGTLPAGSNVQSLIMEIIASFLLMFVVSAVATDNRAIGELAGIAVGMTITVDVFIAGPISGASMNPARSIGPAIVMHQYKSIWVYMVGPFIGTILGGLAYSLIRFTDKPLRELTKSPLFKASSSHS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0208 268 CDD MIP 37 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 Gene3D Glycerol uptake facilitator protein. 3 255 IPR023271 -
Acco11g0208 268 Pfam Major intrinsic protein 31 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 PANTHER AQUAPORIN NIP2-1 11 257 IPR034294 -
Acco11g0208 268 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 NCBIfam MIP family channel protein 41 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g0208 268 SUPERFAMILY Aquaporin-like 33 255 IPR023271 -
Acco11g0208 268 ProSitePatterns MIP family signature. 93 101 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0208 Acco-ChrAcco11 2634300 2636731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0208 7 268 Major Intrinsic Protein MIP AT5G37810 63.806 3.26e-119 340