Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0200 ATGGATGACCAAGTTGTTCAGCGCGTCTTCCATGAAGGAGGTCGCGATTATTATCAACAACAACCTTCTACGTCATCGTCTTCCTCCTCCATCCTTCAATCTCTTCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTGTTAATAAAATCTATCCAAGAACTTCGAGAGAGAAAAGAGGGTCTTGTTACAGTTGGCATTGGTGGTCCTAGTGGTTCTGGTAAAACAAGCTTAGCAGAGAAGGTGGCATCTGTTATTGGTTGTACTCTTATATCAATGGAGAATTATCGCAATGGAGTTGATGAAGGGAATGATTTGGATTCTATAGACTTTGATGCCTTGATCAAGAATCTTGAGGATTTGACCCAAGGCAATGATACAGTGATTCCTGTGTTTGACTATCAACAAAAGAGGCGTGTTGGATATAAAGCCATAAAGAGTGCTTTAACAGGGGTGGTAGTGGTTGATGGGACATATGCTCTACATGCGAAACTGCGGTCTTTGCTAGATATCCGAGTTGCTGTGGTTGGTGGAGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCGCTGGATTACCTTATCGACAGTATTTTCCCATTGTTTCGGAGGCACATTGAACCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTTGTTTCATCATTTAGAGAAGCTATCTACAAGGTGAAATGCAGAAGTCAGTCCCCTGATGGACATTTGAGCTCTGCCTTTCAACAAGATGAGGCCCAAACAGACAATTGTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGAAGAAGCAACAATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACACTAGGGGGGTTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAACGTGTATCTACAACAGTCAGTAATGGCAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACATACATGGTGATGAGGGGAACAAATAGGAAAACAGTTGGAACAGAAGCATTAAAGATGGTTGTAAGTGGCCCTTGGATCACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTAAGTACACCACCACTTGTGTCTAATAAACCTTTGTCTGGTAATCAAGAAGGAGCAATTGTTGCACCAAAGCCAATCCGGATTACCCCTGACATTGTAACTGGAATTGAGGATTTATCTCAGCCATGGACTCGATCCCCAAGAAAATCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTCAGACTGACAACAGTGCACTAGACTTCTCTCATGAAGCAACCACAGATCCTTCTTCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCTGTTCAAGCAATACAGGCTTTGTTGGAGAAGAATGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCTAGTGGGTCTGGAAAGACTAGTTTGGCACATAAAATGGCAAATATCATTGGCTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGAGTGAAGGATTTTAAGTATGATAACTTCAGCTCGCTTGATCTAGCTTTGCTATCAAAGAATATTGATGACATACGGAATGTTCGGAGAACAAAAGTTCCTATCTTTGACTTGGAAAGTGGTGCCCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTACGCTTTGCATCCTGATATCCGAAAATCTATTGACTTATGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGACAAGAGTAGAGTGGGATGTTTTATGTCCCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGTTGCACATTGAACCACATCTTGTCCATGCTCATCTTAAGATAAGAAATGACTTTGACCCGGTTCTTTCCCCCGAGAGTTCATTATTTGTTTTGAAGAGTAACAAAAAAGTAGCTTATCAAGATATTCTTACGATACTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATTTATATTTAAAGCTTCCTGGGATCCCCTTGAACGGACAGTTGACAGAGGGTGATTGTATTAGAGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCGAAAGTGGATTTTGATATTGGCATTAGTACAGTTACAGGTCTTCTCAATCTTGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAAGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCTGGTCCATACATTCAGATCAAGGGTGTTGATAAGGATGCTGTAGCAGCAGCTGGTTCAATGCTTAAATTGGATGACACATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGCGGCATCTACTCTCAGCAGGCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTTAGCATCAGAATGCTCACCAAGCAGGGAGGCTTCCCCAATGGAAGGGGTTATCGAGGAAATGCAGTTGAGGATTAGAAGGCTAGAACGGTGGCTTACTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTTGTGGGTTATTCACTATACCAAAGGAAGCGTCAATGA 2883 0.4083 MDDQVVQRVFHEGGRDYYQQQPSTSSSSSSILQSLPLHVSFDHGYYLLIKSIQELRERKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTLISMENYRNGVDEGNDLDSIDFDALIKNLEDLTQGNDTVIPVFDYQQKRRVGYKAIKSALTGVVVVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRRHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSQSPDGHLSSAFQQDEAQTDNCIEMYLRPPSASEEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRVSTTVSNGNVSVSFETIDALGETYMVMRGTNRKTVGTEALKMVVSGPWITKSYLEMILERKGVPRLSTPPLVSNKPLSGNQEGAIVAPKPIRITPDIVTGIEDLSQPWTRSPRKSKMEPVIATWRFISSDSSQTDNSALDFSHEATTDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKNGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSIDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILTILDPAKFCSSVQKFIDLYLKLPGIPLNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVTGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDDTYTTKSYLQIILENLPALERTFGGIYSQQAARMQEIVEFIQSQGSSLASECSPSREASPMEGVIEEMQLRIRRLERWLTVNTVLWTFLMSALVGYSLYQRKRQ 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0200 960 PRINTS Uridine kinase signature 525 542 - -
Acco11g0200 960 PRINTS Uridine kinase signature 552 563 - -
Acco11g0200 960 PRINTS Uridine kinase signature 646 656 - -
Acco11g0200 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 513 695 IPR027417 -
Acco11g0200 960 Gene3D - 63 243 IPR027417 -
Acco11g0200 960 Gene3D - 524 701 IPR027417 -
Acco11g0200 960 SMART AAA_5 524 668 IPR003593 GO:0016887
Acco11g0200 960 SMART AAA_5 61 218 IPR003593 GO:0016887
Acco11g0200 960 CDD UMPK_like 64 226 - -
Acco11g0200 960 Pfam Phosphoribulokinase / Uridine kinase family 65 223 IPR006083 GO:0005524|GO:0016301
Acco11g0200 960 Pfam Phosphoribulokinase / Uridine kinase family 527 692 IPR006083 GO:0005524|GO:0016301
Acco11g0200 960 CDD UMPK_like 527 695 - -
Acco11g0200 960 Gene3D - 709 872 - -
Acco11g0200 960 SUPERFAMILY CYTH-like phosphatases 733 867 IPR033469 -
Acco11g0200 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 175 IPR027417 -
Acco11g0200 960 PANTHER URIDINE KINASE 11 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0200 Acco-ChrAcco11 2515539 2526603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0200 520 661 PRT Gene Family AT1G55810 25.974 1.09e-08 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0200 11 2515539 2526603 Acco11g0200 11 2515539 2526603 ECH