Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0193 ATGTCTGATTCATGCAGATCCTTCAAGCTTTCCTCTTACACGCCAAATGCCTCCATCATCTCTCTATCATCATCAGCTCCTCATATCACTTCAAACCCTTATTATTGTCTTTGTGCCCACTGTACCAATCTTCTCTCCTTCAATATTCAACAGCTGGGAGAGGAAGAAGGAGGTTTTATTACAAGCAGCTCAAGGTGGGCCCCAACACCATCACAGCTGCTATACCTTGAGCAACTCTACTCACAAGGAACCAAGACTCCTACGGCTCAACAAATCCAGCTAATCGCTTCGCAGCTACGTCGTTTTGGCAACATCCAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCTAGAGACCGCCACTACCACAAACGTCGTCGTTTCGACCTGCAAATTACCTCTCCTCCTGCTCTTCGTCAGCAACAACAAAAAGATCACTTCACTGAAACCCTAATGCTTCAATCACCTCACCACACTTTTCAAGGATTGAGAAGGACAGTTTATGAAGTCAAAGAGCCAAACAAGTGGAACTGCAGTGCCCTTGCACAGGTTTCTGATTCACTGAATAGAGCAGGAAGAGGAGCTTATAGGAGGACTCAAAGAGAGGAGAGAGAAACAATAATTTTGAGAATGAAGAGAGAGGAGAGCCAAGAAGCTAAGAGCCAAATTAAAGATATGTGTTACTTCCTTTCACATTCCAAGAATCTCATCAAAAGCATTACCGATACTTCAACTACAACTCATCATACACAAACTTCAAACCCTGCAAATTCTTATTGTCATGAAGAAGATGAAGAAGTTGCAGATCACAGAACCCTTGAGCTGTTTCCTCTTAAGAGATCAGATGAAGATGATGATGATAATGAGGGCACTGAAAGCAGCAAACATAAATTATGTTCCTTCAATAATATTGCTTCCATGAACTCTGAAGAAATAACTTCCAATCAGTTTTTTGAGTTCCTTCCTTTAAGAAATTGA 984 0.4177 MSDSCRSFKLSSYTPNASIISLSSSAPHITSNPYYCLCAHCTNLLSFNIQQLGEEEGGFITSSSRWAPTPSQLLYLEQLYSQGTKTPTAQQIQLIASQLRRFGNIQAKNVFYWFQNHKARDRHYHKRRRFDLQITSPPALRQQQQKDHFTETLMLQSPHHTFQGLRRTVYEVKEPNKWNCSALAQVSDSLNRAGRGAYRRTQREERETIILRMKREESQEAKSQIKDMCYFLSHSKNLIKSITDTSTTTHHTQTSNPANSYCHEEDEEVADHRTLELFPLKRSDEDDDDNEGTESSKHKLCSFNNIASMNSEEITSNQFFEFLPLRN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0193 327 Gene3D - 61 123 - -
Acco11g0193 327 SUPERFAMILY Homeodomain-like 64 127 IPR009057 -
Acco11g0193 327 ProSiteProfiles 'Homeobox' domain profile. 65 124 IPR001356 GO:0003677
Acco11g0193 327 SMART HOX_1 61 128 IPR001356 GO:0003677
Acco11g0193 327 MobiDBLite consensus disorder prediction 278 297 - -
Acco11g0193 327 MobiDBLite consensus disorder prediction 278 296 - -
Acco11g0193 327 CDD homeodomain 65 123 IPR001356 GO:0003677
Acco11g0193 327 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 57 322 IPR044555 GO:0003700|GO:0099402
Acco11g0193 327 Pfam Homeodomain 63 123 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0193 Acco-ChrAcco11 2461600 2465210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0193 60 182 Wox Gene Family AT3G18010 45.600 1.91e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco11g0193 Homeodomain 4.9e-17 CL0123