Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0165 ATGATAACCCAACGCCTTCATCTCCTCTTCCTCCTCACCGCCGCCTCATTCCACCTTCTCTGTCCATCTGCCGCATCCACCATCGTAGTCGACTCCACCTCTGACTTCAACCCCAGCGCCACCACATTCATCCGCACAAGTTGTAACGCCACCCTGTACCCCGGTCTCTGCTACTCCTCTCTCTCTCCCTACCACAATGCCATCCAACAGAACTCCGCCAAGCTCGCTCGTGTCGCCATAGCACTGACCCTCACTAAGGCCCACCGCATGGCCTCCTACCTCTCCGGCCTCTCTCGCGACACCGACTACGGCATCAACTCACGCGCCGCCTCGGCTCTCCGTGACTGCTTCACCAACCTCGGGGACGCTGTCGACGAAATCCGTGGCTCGCTCAAGCAGATGCGCCAGCTAGCAATCACTGGTGCCGGCAGCGAGCAGTTCAGGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCAGCGCTGACGGATGAGGACACCTGTACGGACGGGTTTGAGGACTTGCCGGAAGTTGGCGTGAAGACAGAAGTATGTGATCGGATGACCTACTTGAAGGAGTTAACCAGTAACGCCTTGGCGCTGGTGAATAGTTACTTTAACAAGGAAATGCGTTAG 636 0.5739 MITQRLHLLFLLTAASFHLLCPSAASTIVVDSTSDFNPSATTFIRTSCNATLYPGLCYSSLSPYHNAIQQNSAKLARVAIALTLTKAHRMASYLSGLSRDTDYGINSRAASALRDCFTNLGDAVDEIRGSLKQMRQLAITGAGSEQFRFQMSNVQTWMSAALTDEDTCTDGFEDLPEVGVKTEVCDRMTYLKELTSNALALVNSYFNKEMR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0165 211 CDD PMEI-like_3 46 205 - -
Acco11g0165 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 205 IPR035513 -
Acco11g0165 211 Pfam Plant invertase/pectin methylesterase inhibitor 43 201 IPR006501 GO:0004857
Acco11g0165 211 NCBIfam pectinesterase inhibitor domain 17 205 IPR006501 GO:0004857
Acco11g0165 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 201 - -
Acco11g0165 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 206 IPR035513 -
Acco11g0165 211 FunFam Pectin methylesterase inhibitor 1 39 205 - -
Acco11g0165 211 SMART PMEI_2 39 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0165 Acco-ChrAcco11 1908943 1909578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0165 8 201 Carbohydrate Esterase AT5G53370 29.500 6.30e-15 70.9