Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0161 ATGTCCAAATCCAAAAGTTTTCTTCAAAGTGTTATGAAACATCTCAAATTCGGTTCAAGCAGAGAGAGACGGAACGAGGACGACGTTCACAGGATTGCTGCCAAGGAGCAGAAGGTGTTTTCCTACGAAACGTTAGTTTCAGCGACGAAGAATTTCAATCTTCATCACAAGCTAGGCGAGGGAGGATTCGGACCAGTTTACAAGGGGAAGCTAGAAGATGGAAGAGAGATAGCAGTGAAGAAGCTATCAATAAGATCAAACCAAGGGAAGAAGGAGTTCATCAATGAGGCAAAGTTGTTGGCGCGTGTGCAGCACCGCAATGTTGTGAATCTGTTGGGCTACTGTGTGTATGGTTCCGAGAAGCTTCTTGTGTACGAGTATGTTCCTCATGAGAGCCTTGACAAAATCCTCTTCAAATCAAATAGGAGAATAGAACTTGACTGGCAAAAGAGGTTTGGAATAATAACAGGAATTGCTAGAGGGTTGCTTTATCTTCATGAAGATGCTCACGACTGCATAATTCACAGAGACATAAAAGCCAGCAATATTCTTCTTGATGATAAATGGAACCCTAAGATAGCAGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATGAAACCCACGTGAAAACTCGTGTGGCTGGAACCAACGGATACATGGCTCCAGAATATATAATGTATGGGCACTTATCGATGAAAGTGGATGTATTCAGTTTTGGAGTCCTGATTTTGGAGATCATTAGTGGTCAACGAAACTTATCATTTAACTTGGATGTGGATGCACAGAACCTAATCGACTGGGCATACAAGCTTTACAAAAAAGGACGAACCTTAGAAATCATGGACAGTTCAATAGCTGCTTCAGCAGTGCCTGAACAAGTAGCAATGTGCATTCAGCTAGGCCTGCTATGCATTCAAGGCGACCCAAGCCTGCGTCCCACCATGCACCGGGTGGTGTTGGTGTTGTCGAAAAAGCCAGGTCACTTGGAAGAACCGATGAGACCCGGTGTTCCGGGTTCAAGATACCGAAAACCTCATAATCCTTATGCATTGTCTTCCACAGTTGATAGTAGTTCTACTGGATCTAGTTCACGAACTGGTACTTCAAGCAATATCTATGACACTAGGTCAACTGCAACGGCGACCACGGCTGCCACAGGTGCAACAGCAACCACCTCAGCTTCCAGAGAATTAGATCGGCGGGGAAAACGTGTAATTGATGAGGATAGGTCATCATTGGTGGGAAGGGATGCTGAGAACTGGGCTAAATGGCTCTCACTCTGTTCATGCTCTCTCTGCTCACTGAATTTACCGGAGGCCGCCCTGCTTAGTTCCATCCCTCTTCTCGAGCTAGAAATGGTGGTATTCAAGGTTTCGAGAGTAGAAACCACGCCTTTTGATGGCCAGAAGCCTGGAACTTCTGGTCTCCGTAAGAAGGTGAAAGTATTCATTCAACCAAATTACCTGCACAATTTTGTTCAGTCATCATTCAATGCTTTGACCTCAGAAAAAGTTAGAGGTGCTACACTAGTTGTATCAGGGGATGGTCGCTATTTTTCAAGGGATGCAATTCAGATTATCACCAAAATGGCGGCAGCAAATGGAGTAAGACGTATTTGGATTGGCCAAAACGGATTGCTTTCAACTCCCGCTGTATCTGCTGTGATACGTGAAAGAGTTGGGGCTGATGGATCCAGAGCAACAGGTGCATTTATTCTGACTGCAAGTCATAATCCTGGTGGTCCTCTTGAGGATTTTGGGATTAAATATAACATGGAAAATGGTGGACCAGCTCCAGAGGGAATTACTAACAAGATCTATGAGAACACAACAACAATTAAGGAGTACTTCATTGCTGAAGATCTGCCTGATGTGGATATAACCACAATAGGTGTTACAAACTTTACTGGCCCCGAAGGACCATTTGATGTTGAGGTTTTTGATTCAGCAAGTGATTATGTAAAGTTGATGAAGTCAATCTTTGATTTCGAGTCTATCAGGAAACTGTTGTCATCTCCGAATTTCACTTTCTGTTATGATGCACTGCATGGAGTTGCTGGAGCTTATGCAAAGCGCATATTTGTGGAAGAGCTTGTGGCAAAAGAAAGCTCTCTACTCAACTGTACACCAAAGGAAGACTTTGGTGGAGGGCACCCAGATCCCAATTTGACCTATGCAAAGGAGTTGGTTGCTCGCATGGGATTGAGCAAATCAGAATTGCAAGATGAGCCACCAGAATTTGGTGCTGCTGCTGATGGTGACGCAGATCGTAACATGATACTTGGTAAAAGGTTTTTTGTCACTCCATCTGATTCTGTAGCCATAATTGCTGCAAATGCTGTTGAAGCTATACCCTATTTTTCTAGCGGCTTGAAGGGAGTTGCCAGGAGTATGCCAACATCTGCTGCCCTAGATGTTGTGGCCAAACATTTGAACTTGAAATTTTTTGAGGTCCCCACTGGTTGGAAGTTTTTTGGTAACTTAATGGATGCTGGATTATGTTCAATATGTGGGGAAGAAAGTTTTGGAACTGGTTCGGACCATATTCGTGAGAAAGATGGGATCTGGGCAGTTCTGGCCTGGTTATCTATTCTTGCATATAAAAATAAAGATAAGCTTGGTGGAGACAAACTTGTGACAGTTGAAGACATAGTTGTTCAGCATTGGGCTACTTATGGGCGCCATTTCTATACACGATATGACTATGAAAATGTGGATGCAGGTGCAGCAAAGGAACTGATGGCATACTTGGTCAAACTGCAGTCCTCTCTTTCTGAAGTCAATCAGATTATAAAGGGAGCAAGGTCAGATGTGTCAAATGTTGTCCATGCTGATGAATTTGAATATAAAGATCCTGTGGATGGTTCCATTTCATCACACCAGGGCATCCGTTATTTGTTTGAGGATGGATCACGATTGATCTTCCGTCTCTCTGGAACTGGCTCGGAAGGAGCGACAATTCGTCTATACATTGAGCAATATGAGAAGGATTCATCAAAAACTGGGAAACTTTCACACGAAGCGCTTGCTCCTCTTGTGGAGGTTGCACTGAAACTTTCTAAGATGCAAGAATTCACCGGCCGTTCTTCTCCAACCGTCATTACATAA 3108 0.4373 MSKSKSFLQSVMKHLKFGSSRERRNEDDVHRIAAKEQKVFSYETLVSATKNFNLHHKLGEGGFGPVYKGKLEDGREIAVKKLSIRSNQGKKEFINEAKLLARVQHRNVVNLLGYCVYGSEKLLVYEYVPHESLDKILFKSNRRIELDWQKRFGIITGIARGLLYLHEDAHDCIIHRDIKASNILLDDKWNPKIADFGMARLFPEDETHVKTRVAGTNGYMAPEYIMYGHLSMKVDVFSFGVLILEIISGQRNLSFNLDVDAQNLIDWAYKLYKKGRTLEIMDSSIAASAVPEQVAMCIQLGLLCIQGDPSLRPTMHRVVLVLSKKPGHLEEPMRPGVPGSRYRKPHNPYALSSTVDSSSTGSSSRTGTSSNIYDTRSTATATTAATGATATTSASRELDRRGKRVIDEDRSSLVGRDAENWAKWLSLCSCSLCSLNLPEAALLSSIPLLELEMVVFKVSRVETTPFDGQKPGTSGLRKKVKVFIQPNYLHNFVQSSFNALTSEKVRGATLVVSGDGRYFSRDAIQIITKMAAANGVRRIWIGQNGLLSTPAVSAVIRERVGADGSRATGAFILTASHNPGGPLEDFGIKYNMENGGPAPEGITNKIYENTTTIKEYFIAEDLPDVDITTIGVTNFTGPEGPFDVEVFDSASDYVKLMKSIFDFESIRKLLSSPNFTFCYDALHGVAGAYAKRIFVEELVAKESSLLNCTPKEDFGGGHPDPNLTYAKELVARMGLSKSELQDEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVEAIPYFSSGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDKLGGDKLVTVEDIVVQHWATYGRHFYTRYDYENVDAGAAKELMAYLVKLQSSLSEVNQIIKGARSDVSNVVHADEFEYKDPVDGSISSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDSSKTGKLSHEALAPLVEVALKLSKMQEFTGRSSPTVIT 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0161 1035 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 469 616 IPR005844 GO:0005975|GO:0016868
Acco11g0161 1035 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Acco11g0161 1035 CDD PGM1 461 1035 - -
Acco11g0161 1035 FunFam Phosphoglucomutase 5 875 1035 - -
Acco11g0161 1035 Gene3D - 875 1035 - -
Acco11g0161 1035 Gene3D - 457 656 - -
Acco11g0161 1035 FunFam Phosphoglucomutase, cytoplasmic 1 766 864 - -
Acco11g0161 1035 CDD STKc_IRAK 58 324 - -
Acco11g0161 1035 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 769 892 IPR005846 GO:0005975|GO:0016868
Acco11g0161 1035 Pfam Protein kinase domain 53 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0161 1035 FunFam Phosphoglucomutase 5 657 765 - -
Acco11g0161 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Acco11g0161 1035 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 570 579 IPR016066 GO:0000287
Acco11g0161 1035 SUPERFAMILY Phosphoglucomutase, C-terminal domain 894 1035 IPR036900 GO:0016868|GO:0071704
Acco11g0161 1035 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 652 761 IPR005845 GO:0005975
Acco11g0161 1035 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0161 1035 Gene3D - 657 765 - -
Acco11g0161 1035 PRINTS Phosphoglucomutase/phosphomannomutase family signature 710 723 IPR005841 GO:0005975|GO:0016868
Acco11g0161 1035 PRINTS Phosphoglucomutase/phosphomannomutase family signature 569 583 IPR005841 GO:0005975|GO:0016868
Acco11g0161 1035 PRINTS Phosphoglucomutase/phosphomannomutase family signature 674 693 IPR005841 GO:0005975|GO:0016868
Acco11g0161 1035 PRINTS Phosphoglucomutase/phosphomannomutase family signature 745 760 IPR005841 GO:0005975|GO:0016868
Acco11g0161 1035 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0161 1035 MobiDBLite consensus disorder prediction 350 375 - -
Acco11g0161 1035 Gene3D Phosphorylase Kinase; domain 1 14 127 - -
Acco11g0161 1035 MobiDBLite consensus disorder prediction 329 375 - -
Acco11g0161 1035 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Acco11g0161 1035 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 455 1035 IPR045244 GO:0004614|GO:0005975
Acco11g0161 1035 SUPERFAMILY Phosphoglucomutase, first 3 domains 456 681 IPR016055 GO:0005975|GO:0016868
Acco11g0161 1035 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Acco11g0161 1035 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 945 1001 IPR005843 GO:0016868|GO:0071704
Acco11g0161 1035 SUPERFAMILY Phosphoglucomutase, first 3 domains 753 899 IPR016055 GO:0005975|GO:0016868
Acco11g0161 1035 SUPERFAMILY Protein kinase-like (PK-like) 37 346 IPR011009 -
Acco11g0161 1035 SUPERFAMILY Phosphoglucomutase, first 3 domains 651 766 IPR016055 GO:0005975|GO:0016868
Acco11g0161 1035 Gene3D - 766 864 - -
Acco11g0161 1035 FunFam Phosphoglucomutase 5 457 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0161 Acco-ChrAcco11 1841864 1857746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0161 40 336 Receptor kinase-like Gene Family AT4G11530 52.508 2.47e-101 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco11g0161 Pkinase 1.1e-49 CL0016