Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0159 ATGCCTTTTCTTATTTCTTTTTTTCTAGTATTGAAAGAGAGCTTTAAGATTTATTGTGCTATTAAAGATGGAATTATCATTCTCATTAATAAGTTTTTTGAGATGCCCAGACATGAGGCCATTACAGCCTTTGATATCTATAAACATGCTAGTCTGAAGTGGTTTCATGTTTTGTTTGACATGCATGCTTCTGTGTTTAACCTTAATATGATTCCCATTGTGCTTTCTTCGGTCAATGAGAGGCAATTGGTAAGGATTCATCATTATTACGTCGACAGGGTTCTAAATTTAAGGACATCAGATACTCTCCCATATCTTATCAAACTGTCACAGGCAATTGAGAGTTCCTTGAGAATGGATGATGATTTCTTGAATGATTTCTTGAGAATGGATGATGATTTGAGAGATGATGAATACTTCTCGCAAATGGCTGATGATTTCTTGAGAATGCATGATGATCAGATACAGTTCTCACCTGATAACAGTTGTGGAGCTGATATTCTAAAGTATTTCGATGAGTCTATCGATTATGCAGTTGACTTTGGAACAAACCCTCCCCAAGATTCAACTCAAGATCACCCTGTCTTGCCGGCGGAGCCAGTTGAAGATTCTATTCCAATGGGTGGAGGTGTCCCGCCATTACCCTCTACTGGCGGAGATGAGCTCACAACAAATCCTCAACCAGATTCAGCGCACCGTCGCCGTATCATACTGGATCCCATATATGAAACTTTCTTTAAAGGGCTAGATGAATCGCCAAGATCACCCACTTGTGATGTTCTACCTCTACAAGATAATCTGAGTGACAGTGTTGAGGCTTCAAAGGCTACACCAGATTCAACTCAACAACACCCTCCTCCTACTTCACAGTCTTTGGAAGTTCCTGTTTCCACTTCTCAACCACTTCAAAATGTTTCAAATCAGCAACATGTTCATGCCCAACTGTATCAACCCAAGCCAAGTCCTCTGCAGTCACCAACTCCCCCAAATAAGAGGCAGAAGTTATCAAGCAAGCGATGCGGATGTAAGGCCAGCAAATGTCGACAAGGTTATTGTGCATGTTATGCTGCTGGAGAATTATGTGGCGAAAACTGTAGCTGCCAAGGTTGTTTAAACAAATCGGAATATGAAGCAATAGAGAAAAGGAGCGACAATATGCGTCATAATCCGCAGGAATTGTATGGAGCACCTCCCCTGAATCCATTTGCTCCATCGCCAGCTATCAATATAGCCTCTATGGCTCACCAGCAAGCGAATTCGTTTTCCACATCCAGCAACATCTCTGCACCTCCAGCAGTCCAAATGGCTGTGATGGCTCAACAGCAAGCAAATTCATCTACCACATCAAGCAACATATCTCCGCCACCGGCCGTCCAAACAGCCACGATGTTTCAACAGCAAGTGAATTCATTTACCACATCAAGTAACATCTCTTCACCACAGGCTGTCCAAATGGCAATGACTGCTCCGGCGAATCCATTTGTCCCATCAAGCAACATCTCTCCACCGCATGCGGTCCAAATGGCTGTTATGGCTCAGCCACAGGCGAATCCATATGCCACATTAAGCAACATCTCTCCACCGCATGCAGTCCAAATGGCTGTTATGGCTCAGCCACAGGCGAATCCATTTGCCACATCAAGCAACATCTCTCCACCGCATGCGGTCCAAATGGCTGTTATGGCTCAGCCACAGGCGAATCCATATGCCACATTAAGCAACATCTCTCCACCGCATGCAGTCCAAATGGCTGTTATGGCTCAGCCACAGGCGAATCCATTTGCCACATCAAGCAACATCTCTCCACCGCATGCGGTCCAAATGGCTGTTATGGTTCAGCCACAGGCGAATCCATATGCCACATCAAGCAACATCTCTCCACTGCCGGCCATCCAAATGGCTGGCATGGATCAATCGCGAGGAAATCCTGGCACAACCTATCAGCCTCAGCAGCAACATATGTTGATGAACCCAACTAATCCACAACAAATGGGTCATAGGGTGTTTTCTGTGAATTCTGGTTCTAGATCGCCATTAATGCCAGTACCTCCAAGACTCCGTCAGGAAGCCAACAAGATCAACATGTATTGGAAGCAGCTACCAAGATAA 2109 0.4471 MPFLISFFLVLKESFKIYCAIKDGIIILINKFFEMPRHEAITAFDIYKHASLKWFHVLFDMHASVFNLNMIPIVLSSVNERQLVRIHHYYVDRVLNLRTSDTLPYLIKLSQAIESSLRMDDDFLNDFLRMDDDLRDDEYFSQMADDFLRMHDDQIQFSPDNSCGADILKYFDESIDYAVDFGTNPPQDSTQDHPVLPAEPVEDSIPMGGGVPPLPSTGGDELTTNPQPDSAHRRRIILDPIYETFFKGLDESPRSPTCDVLPLQDNLSDSVEASKATPDSTQQHPPPTSQSLEVPVSTSQPLQNVSNQQHVHAQLYQPKPSPLQSPTPPNKRQKLSSKRCGCKASKCRQGYCACYAAGELCGENCSCQGCLNKSEYEAIEKRSDNMRHNPQELYGAPPLNPFAPSPAINIASMAHQQANSFSTSSNISAPPAVQMAVMAQQQANSSTTSSNISPPPAVQTATMFQQQVNSFTTSSNISSPQAVQMAMTAPANPFVPSSNISPPHAVQMAVMAQPQANPYATLSNISPPHAVQMAVMAQPQANPFATSSNISPPHAVQMAVMAQPQANPYATLSNISPPHAVQMAVMAQPQANPFATSSNISPPHAVQMAVMVQPQANPYATSSNISPLPAIQMAGMDQSRGNPGTTYQPQQQHMLMNPTNPQQMGHRVFSVNSGSRSPLMPVPPRLRQEANKINMYWKQLPR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0159 702 MobiDBLite consensus disorder prediction 269 312 - -
Acco11g0159 702 Pfam ANTH domain 5 51 IPR011417 GO:0005543
Acco11g0159 702 ProSiteProfiles CRC domain profile. 336 390 IPR005172 -
Acco11g0159 702 SUPERFAMILY GAT-like domain 6 52 - -
Acco11g0159 702 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 338 373 IPR005172 -
Acco11g0159 702 Gene3D ANTH domain 3 57 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Acco11g0159 702 SMART CXC_2 335 376 IPR033467 -
Acco11g0159 702 MobiDBLite consensus disorder prediction 180 235 - -
Acco11g0159 702 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 274 379 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0159 Acco-ChrAcco11 1813994 1820043 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0159 317 379 CPP Transcription Factor Family AT4G14770 44.928 2.07e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Acco11g0159 ANTH 9.6e-10 CL0009