Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0148 ATGGATCAGGGCTTTCTGGGGATCCTCAAAATTCGTATTAAAAAAGGAATCAACCTGGCAGTACGTGACAGTCGTACAAGTGATCCTTACGTTGTTATCACCATGCGCGAACAGAAACTGAGAACTAAAGCTGTTGAAGATGACTGCAATCCTGAGTGGGACGATGAGCTGACATTGTACGTAAAGAGAATCAATGATCCAATCATTCTAACAGTGTTCGACAAGGACACGTTCACGGAGGACGATCCAATGGGGGAAGCAGAGTTAGATATAAAGCCTTTGCTACAGTGTGTGAAGATGACAGAAAATCTGAAAGAAGGATGTGTGGTCAATAGAGTTAAGCCCAGCAAGAATAACTGTCTCTCTGAAGAAAGCTTGTGCACCTGGGTTGACGGAAAATTCCGACAAGAACTGCTTCTCAAATTGAACAAAGTTGAGCGAGGTGAATTACTCGTCGAAGTTGTGTGGAATGATGAAGGTTGTTTGGGATTATCCAACGTTAACTTGTGA 510 0.4294 MDQGFLGILKIRIKKGINLAVRDSRTSDPYVVITMREQKLRTKAVEDDCNPEWDDELTLYVKRINDPIILTVFDKDTFTEDDPMGEAELDIKPLLQCVKMTENLKEGCVVNRVKPSKNNCLSEESLCTWVDGKFRQELLLKLNKVERGELLVEVVWNDEGCLGLSNVNL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0148 169 SMART C2_3c 8 103 IPR000008 -
Acco11g0148 169 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Acco11g0148 169 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 157 IPR044562 -
Acco11g0148 169 Pfam C2 domain 7 96 IPR000008 -
Acco11g0148 169 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 155 IPR035892 -
Acco11g0148 169 Gene3D C2 domain 6 160 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0148 Acco-ChrAcco11 1734137 1736147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0148 39 165 C2H2 Transcription Factor Family AT1G70790 47.328 2.07e-40 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0148 11 1734137 1736147 Acco11g0148 11 1734137 1736147 ECH
Acco11g0148 11 1734137 1736147 Acco05g1411 05 29691203 29698769 ECH