Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0134 ATGCCTTCGTCGGATGAAACTGGTGGTTCGTATGAGGAAACAGGGGAGAGGAGGAGGAGAAACAGAGGAGTGAGGCAGAGGCCATGGGGTAAGTGGGCGGGCGAGATTCGCGACCCTCACAGGGCAGCGAGGGTATGGCTTGGCACGTCTAAGACGGCGGAGGCGGTTGCCAGAGCTTATGACGAAGCCACATTGAGGTTCAGAGGTAGCAAAGCCAAACTAAACTTTTCCAGAAAACGTCAGGGCAGTCCGATCACCAGCCACGTCTTTCAGCCGTCCTCTACGGCGGCGTTTCTATCACGTAATATCCTTAGTTAG 318 0.5503 MPSSDETGGSYEETGERRRRNRGVRQRPWGKWAGEIRDPHRAARVWLGTSKTAEAVARAYDEATLRFRGSKAKLNFSRKRQGSPITSHVFQPSSTAAFLSRNILS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0134 105 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Acco11g0134 105 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Acco11g0134 105 FunFam Ethylene-responsive transcription factor 2 20 78 - -
Acco11g0134 105 Coils Coil 104 105 - -
Acco11g0134 105 CDD AP2 28 76 IPR001471 GO:0003700|GO:0006355
Acco11g0134 105 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Acco11g0134 105 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Acco11g0134 105 Pfam AP2 domain 21 69 IPR001471 GO:0003700|GO:0006355
Acco11g0134 105 PANTHER DNA-BINDING DOMAIN 12 81 IPR044808 GO:0003700|GO:0009873
Acco11g0134 105 MobiDBLite consensus disorder prediction 1 28 - -
Acco11g0134 105 SUPERFAMILY DNA-binding domain 21 78 IPR016177 GO:0003677
Acco11g0134 105 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0134 Acco-ChrAcco11 1492371 1492688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0134 6 81 AP2-EREBP Transcription Factor Family AT5G61890 63.636 7.41e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco11g0134 AP2 1.2e-08 CL0081