Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0133 ATGGAGGATTCAGGGTTTCTTTATGGAATTTTCCCTCAAGGCTTGAAGATCCTCTTAGTGGGCATTGATAATGTTACCCAAGATTTAATTGAGACATATCTTCCACAACCTTTTTATCAAATCACTGTTCTTCCCGAATATACTCATCCCATAAGTTTCTTAGAAGACAGACCTAATTCTTTTGACTTGGTTATCAGTGATGTCGTTTTGGAACACATAGATGGCTACCAGTTCATCAGAGACCAACGCCAGATAACAAATATTCCTCATATTATAATATGTGGGCTTGAAACATCAAGCTACGATGAGATGATGCTGAGACCATTTATATGTGGCGCGTGTTATGTTTTGTGGAAGCCCGTAAGTGTGGGTGAACTGAAAAACTTATGGCAACATATTTATAGGAGTCGAGAACAAAGGAGGAGGAGGGAGATTATTGGGAATGAACAACAAGGTGAGATTATTGAGAATGAACCTAACAGTGACGTGGAGGACCCGGATCAGATTCAGCAGAATCTGAATCCAGATAAGGATCCAAAAGCTAATCGAAAGGTAGTAAGCGCGAGCGGGTTTATAAATTGTGTCGGGGAATCTTCATCGAAAAAACGACGACGACGAATTGTTTGGACTCCAGAACTCCATGACGAGTTTCTCGAAGCTGTGGAAAAACTTGATGGCGCTGACAAGGCAGTGCCTAAAGCAATACTTGGAGCCATGGATAATTCCTTTTTGACTAGAGAAAATGTTGCAAGTCACTTACAGATGAAAGAGCAGCCAGAATCTATCAATGTGATCAAGCCTGTGATGAACCGAACCCCTCCATCTAGTCCAGGAGAAACCAGCTATCGAAGATTTGACAATACTAATGATAATAAAGTATCGGTTCTAGAACCTTGCACGACTCATCATCACTTAACCGATGCCCAATCTCATCAATTTCAACATTTCCTTACCGGCCCGCAAATGCTAATGCAAAATCAAAAGCAACCTGAACAAAACTTCAACTATGGTCATGTGATTCCACGGTCAACGTTACTTTCATCATCTTTTCCAAGACAGCAACGGAACTTGGTTTCTTCTATGTCGCAGCTAAATCAAAACCTAGCTTCAGCTTCTAGTTATGTTCCTCCTATTAGAGGTGGTAATGGAGGAATCGTAACGCCAGAAGCTGGTGATTCTGAAATGATTGATTACTCTTATTTGAATGACTTCATTGAATCAGAACATTTCATTCCTCCGTATTAG 1245 0.4064 MEDSGFLYGIFPQGLKILLVGIDNVTQDLIETYLPQPFYQITVLPEYTHPISFLEDRPNSFDLVISDVVLEHIDGYQFIRDQRQITNIPHIIICGLETSSYDEMMLRPFICGACYVLWKPVSVGELKNLWQHIYRSREQRRRREIIGNEQQGEIIENEPNSDVEDPDQIQQNLNPDKDPKANRKVVSASGFINCVGESSSKKRRRRIVWTPELHDEFLEAVEKLDGADKAVPKAILGAMDNSFLTRENVASHLQMKEQPESINVIKPVMNRTPPSSPGETSYRRFDNTNDNKVSVLEPCTTHHHLTDAQSHQFQHFLTGPQMLMQNQKQPEQNFNYGHVIPRSTLLSSSFPRQQRNLVSSMSQLNQNLASASSYVPPIRGGNGGIVTPEAGDSEMIDYSYLNDFIESEHFIPPY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0133 414 SUPERFAMILY CheY-like 13 145 IPR011006 -
Acco11g0133 414 Gene3D - 203 258 - -
Acco11g0133 414 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 310 IPR045279 GO:0009736
Acco11g0133 414 Gene3D - 15 153 - -
Acco11g0133 414 ProSiteProfiles Response regulatory domain profile. 16 134 IPR001789 GO:0000160
Acco11g0133 414 MobiDBLite consensus disorder prediction 268 286 - -
Acco11g0133 414 MobiDBLite consensus disorder prediction 148 182 - -
Acco11g0133 414 NCBIfam myb-like DNA-binding domain, SHAQKYF class 205 255 IPR006447 GO:0003677
Acco11g0133 414 MobiDBLite consensus disorder prediction 267 286 - -
Acco11g0133 414 FunFam Two-component response regulator 199 257 - -
Acco11g0133 414 SUPERFAMILY Homeodomain-like 202 255 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0133 Acco-ChrAcco11 1488059 1490558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0133 11 254 Response Regulator Gene Family AT2G25180 33.871 4.24e-35 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco11g0133 None None None