Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0132 ATGCAGAAATCTGCAGCCAGTCATTGTCGTCGTTGTCTTCATATTCCTCCTCCTTTCTTTACTAAATATTTCCCTAACGGCTTGAAGCTACTCTTAGTGGGCGTTGATGAAACTACCCTAACTAAAGTTCAGAAATATCTCCCACGACCTTATTATGAAATTTATACGTGTTACAAAGCTGAGGATGCCCTAGAACACCTACAAAAGGGAGGAAACAATTTTTATAACTTGGTTTTCAGTGGAGTCGGGTCGGAAGACAAAGATGGCTACCCGTTCATCAGAGCAGTACGACTCTCGTGCTCAAATATTGCCCACGTTGCAATAAGTGAGAGTGAAACATCAACTGATGAGATCCTGAGAGCATATGAAAGTGGTGCATGTACTGTTTTGTGGAAGCCAGTGAGTGTGGTTAAGGATGAGATTGTAAATTTATGGAAACATGTTTGTCTGAAGAAGGAACAATGCAAGGCATCTGAGACTCACTTATCCAATAACAACAATGTGATGCCTGAGACTCACTTATGTGATGTGGAACATTTGAGGAGGGAACAACACGAGACGTCTGAGACTTACTTGAATAACAGCGATGGTTTGTACCACGGCGACAACATACAGCAAAATAGATCAGTACCCCTAGTACTACAGAATCAGGATCAAGGTTGTTCTTCTCACTTATGTGATGTGGAACATTTGAGGAGGGAACAACACGAGACGTCTGAGACTTACTTGAATAACAGCGATGGTTTGTACCACGGCGATTACATACAGCAAAATGGATCAGGACCCCTAGTACTACAGAATCAGGATCAAGGTTGTTCTTCTCTTTGTGCTATTGAAAACGAGTTTTTGAATCTTGGCACAGAATCTCCACCGAAAAAACGTCGACTCGTCTGGAATGGTCTCCTCCAAAAATGTTTTCTTGATACTGTTGACGAACTTGGCGGTCCAGAAAAAGCGATGCCAAAACCTATTCTTACAAGGATACAGAAAGAAATGCATGTCCCTGAACTGACGAGAGAAAATGTTGCAAGTCACTTACAGAAATTTAGACAGCAAAAGATAAAAGAGAGGGAGCTACATGCCTCAATTTCCCCTTTCGAACACAACCATCATAATCATTCCCTTGCCCACCTGCCCATGCAAATGCAAATACAACCATCTGAACAAAACTTCTACAACTTTGATGGTGTGGCTCCATTGTCAACCGTACCCTCATTTCTTATGGGGAATGGAAGCAATAACGTGACTTATTCTTTGAAAAGGCTAAATCTAAGGTCGGATTCTTCCTGTGCAATTCCAGCTTCTGGTACTTATGTTACTACTACCAGAGGTAACCAACAGGTTGGTAACTTATTTGTAAGTAATACGCTGCAGCAACCACAAATTGCTTCCTTTGAAGGTAATATACTGCAACCACACCAAAACCAGAATTTTAGTAGGTATCAGCTTGATCGATATGTTACTGCCAGGGGTGCTAATAATGAGGGAACCCAAGTTATGGGTAATTCTTTTGCCTTCTCCAGTAATACTGGTGCGCAACAAATAGATCAAAACCCAGATACAGGTTCCGGAATCCAAGCTATGGGTAATTCTTTTACCTTCTCCAGTAATACTGGTGTGCAACAAATAGATCAAAACCCAGATTCAAGTTCCGGAATCCAAGCTATGGGTAATTCCTTCATCTTCTCAAGTAATACTGGTGCACAACAAATAGATCAAAACCCAGATTTAGGTTCCGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCAAGTAATACTGGTGCACAACAAATAGATCAAAACCCACATTCAAGTTCCGAAATCCAAGCTATGGGTAATTCCTTCACCTTCTCCAGTAATACTGTTGCGCAACAAATAGATCAAAACCTACATTCAGGTTCCGGAATCCAAGCTATGGGTAATTCTTTCACCTTCTCCAGCAATACTGGTGCGCAACAAATAGATCAAAACCCAGATTCAGGTTCTGGAATCCAAGCTATAGGTAATTCCTTCACCTTCCCAAGTAATATTGGTGCGCAACAAATAGATCAAAACCCACATTCAGGTTCCGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCAAGTAATACTGGTGCGCAACAAATAGATCAAAACCCAGATTCAGGTTCCGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCCAGTAATACCGGTGCGCAACAAATAAATCATCAAAACCCAGATTCAGGTTCTGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCAAGTAATACTGGTGCGCAACAAATAGATCAAAACCCAGATTCAGGTTCCGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCCAGTAATACCGGTGCGCAACAAATAAATCATCAAAACCCAGATTCAGGTTCTGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCAAGTAATACTGGTGCGCAACAAATAGATCAAAACCCAGATTCAGGTTCCGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCCAGTAATACCGGTGCGCAACAAATAAATCATCAAAACCCAGATTCAGGTTCTGGAATCCAAGCTATGGGTAATTCCTTCACCTTCCCAAGTAATATTGATGTGCAACAAATAGATCAAAACCCAGATTCAGGTTCCGGAATCCAAGCTATGGGTAATTCCTTCACCTTCTCAAGTAATACTGGTGCACAACAAATAGATCAAAAACCAGATTTGGGCTCTTCTTCTCATGTCAGTACTAATTATAATGAAATCATAAATCAAAACCAAGCTCTAGGTATTTCTATTGGAACTAATATACAAGAGCCATCAAATATGATGCAGACACCTCCAAACCCGACTTCTACTATGCAACAACTATGTCAAAACCCATCTTCAAGTTCTGGAATCATAAACCAAAACCAAGCGTTACCTCCAAACCCGACTTCTACTATGCAATGA 2973 0.412 MQKSAASHCRRCLHIPPPFFTKYFPNGLKLLLVGVDETTLTKVQKYLPRPYYEIYTCYKAEDALEHLQKGGNNFYNLVFSGVGSEDKDGYPFIRAVRLSCSNIAHVAISESETSTDEILRAYESGACTVLWKPVSVVKDEIVNLWKHVCLKKEQCKASETHLSNNNNVMPETHLCDVEHLRREQHETSETYLNNSDGLYHGDNIQQNRSVPLVLQNQDQGCSSHLCDVEHLRREQHETSETYLNNSDGLYHGDYIQQNGSGPLVLQNQDQGCSSLCAIENEFLNLGTESPPKKRRLVWNGLLQKCFLDTVDELGGPEKAMPKPILTRIQKEMHVPELTRENVASHLQKFRQQKIKERELHASISPFEHNHHNHSLAHLPMQMQIQPSEQNFYNFDGVAPLSTVPSFLMGNGSNNVTYSLKRLNLRSDSSCAIPASGTYVTTTRGNQQVGNLFVSNTLQQPQIASFEGNILQPHQNQNFSRYQLDRYVTARGANNEGTQVMGNSFAFSSNTGAQQIDQNPDTGSGIQAMGNSFTFSSNTGVQQIDQNPDSSSGIQAMGNSFIFSSNTGAQQIDQNPDLGSGIQAMGNSFTFSSNTGAQQIDQNPHSSSEIQAMGNSFTFSSNTVAQQIDQNLHSGSGIQAMGNSFTFSSNTGAQQIDQNPDSGSGIQAIGNSFTFPSNIGAQQIDQNPHSGSGIQAMGNSFTFSSNTGAQQIDQNPDSGSGIQAMGNSFTFSSNTGAQQINHQNPDSGSGIQAMGNSFTFSSNTGAQQIDQNPDSGSGIQAMGNSFTFSSNTGAQQINHQNPDSGSGIQAMGNSFTFSSNTGAQQIDQNPDSGSGIQAMGNSFTFSSNTGAQQINHQNPDSGSGIQAMGNSFTFPSNIDVQQIDQNPDSGSGIQAMGNSFTFSSNTGAQQIDQKPDLGSSSHVSTNYNEIINQNQALGISIGTNIQEPSNMMQTPPNPTSTMQQLCQNPSSSSGIINQNQALPPNPTSTMQ 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0132 990 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 362 IPR045279 GO:0009736
Acco11g0132 990 ProSiteProfiles Response regulatory domain profile. 29 147 IPR001789 GO:0000160
Acco11g0132 990 SUPERFAMILY Homeodomain-like 291 352 IPR009057 -
Acco11g0132 990 Gene3D - 28 167 - -
Acco11g0132 990 MobiDBLite consensus disorder prediction 947 990 - -
Acco11g0132 990 Gene3D - 291 355 - -
Acco11g0132 990 NCBIfam myb-like DNA-binding domain, SHAQKYF class 293 352 IPR006447 GO:0003677
Acco11g0132 990 MobiDBLite consensus disorder prediction 759 872 - -
Acco11g0132 990 SUPERFAMILY CheY-like 26 148 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0132 Acco-ChrAcco11 1467160 1471985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0132 292 350 Response Regulator Gene Family AT4G31920 55.932 2.29e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco11g0132 None None None