Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0128 ATGCTTGACCAGATGCAGCTGTTGGCCTACTACAACGTCCTCATGGAGAGCAGTCATGGAGATCGGAGTGTACACTGCAACAGCGTTACACGCGAAATTTCCTTCCCATTGCTTTACACTGTTCTGCTCCTTTTTGCTCTCACCCTCTACAAAAGCCAAGTGAAAGACCTGGACTTTGCTTGCTCCTTGGGGTTGAGAGAATTCAGGGGAATCCGACTGATTTTTCGCGTGAATTGGGTTTTCTTTGGTGTGACTTCGTCGAAAGGGATGGTAAAATCTTCCGATAATGGTTTCGGTTCTGTGGCGCCTTTCCTGAAAAAATGTTATGAGATGGTGGACGATGAGTCAACCGATTCGCTCATATCCTGGAGCAAAAGCAATGATAGTTTTATCATATGGGACATGACTGAGTTCTCCGTGAGTTTACTTCCCAAGTATTTCAAGCACAACAATTTCTCCAGTTTCATCCGGCAGCTTAATATTTATGGTTTCAGGAAAACTGATACTGATCGCTGGGAATTTGCTAATGATGACTTCATCCGAGGTCAAAAGCATTTACTAAAGAATATATTGAGAAGAAAACATCCACATGTTGCAGATCAGCGAAAGCCATTAGAGCGGCAAGAGAATCATGATGTGCCTTCTCAAGAAGTTAAACACTACGACCTACGAAAAGAAGTTGAGAATTTGAAAGATGATAAAAATGCACTCACTCAGGAGTTGGTTAAACTTAGGCAGCACCAGGAATCATCTAAGGACAAGTTGCTGCTCCTGACCAATCGGCTCCAAGGAATGGAAAAGAGTCAGCAACAGATGTTATCATTCTTGGTCATGGCCATGCAAATCCCTGGGTTCATGGTTCAACTGCTTCAGCCCAAGGAAAATGGTTGGCGTACAACTGAGACAAGCAATATGTTGGAACACGGCATGGAGGATGTTCAGCAAGTTGCTTCTGATGGGATGATAATGAAGTATCAACCACCCTTGAGTGAAAAACTGAAGCCTGTGGTTACACCATCTCCTGTTTCAGATGAGCAACTGGAACCTAATCTCTGTACTGATGTGTTGAAAGATTATTTCATCAATTCTGACTTCTTGAAAGTACTCATGGATGAAAAATTGTGTCAAATAGATACTCATTCTCCATTTAATCTACCAAATTTACCCGATGATAATGCCTGGGAACAGCTTCTTTTAGGCAGTCCCTTCACTGAAAATGAAGATTCAAATATGGAAAGTGATAAGCCCACCAACAATGGAATGGAGATCGAGCCTGCTATATGTGAAACACTGTTTGATAAATTCCAAAATTGTGTTGGGTTGATGCCCGAAATGGACAAAACTCAGAAGAGTGGATTGGAAGCATCTGCCAACGGTGTTCATCTGGAGAAGCTGCAGAGTTTGGAATCCCTGACTGAGGAAATAGAACTTCTGGCTTCTGAACCAAATGAGAAGTAG 1458 0.4246 MLDQMQLLAYYNVLMESSHGDRSVHCNSVTREISFPLLYTVLLLFALTLYKSQVKDLDFACSLGLREFRGIRLIFRVNWVFFGVTSSKGMVKSSDNGFGSVAPFLKKCYEMVDDESTDSLISWSKSNDSFIIWDMTEFSVSLLPKYFKHNNFSSFIRQLNIYGFRKTDTDRWEFANDDFIRGQKHLLKNILRRKHPHVADQRKPLERQENHDVPSQEVKHYDLRKEVENLKDDKNALTQELVKLRQHQESSKDKLLLLTNRLQGMEKSQQQMLSFLVMAMQIPGFMVQLLQPKENGWRTTETSNMLEHGMEDVQQVASDGMIMKYQPPLSEKLKPVVTPSPVSDEQLEPNLCTDVLKDYFINSDFLKVLMDEKLCQIDTHSPFNLPNLPDDNAWEQLLLGSPFTENEDSNMESDKPTNNGMEIEPAICETLFDKFQNCVGLMPEMDKTQKSGLEASANGVHLEKLQSLESLTEEIELLASEPNEK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0128 485 FunFam Heat shock transcription factor 1 98 194 - -
Acco11g0128 485 SMART hsfneu3 100 193 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco11g0128 485 Pfam HSF-type DNA-binding 104 193 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco11g0128 485 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 92 305 IPR027725 -
Acco11g0128 485 Coils Coil 220 247 - -
Acco11g0128 485 SUPERFAMILY "Winged helix" DNA-binding domain 100 193 IPR036390 -
Acco11g0128 485 PRINTS Heat shock factor (HSF) domain signature 155 167 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco11g0128 485 PRINTS Heat shock factor (HSF) domain signature 142 154 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco11g0128 485 PRINTS Heat shock factor (HSF) domain signature 104 127 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco11g0128 485 Gene3D - 98 194 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0128 Acco-ChrAcco11 1413008 1422822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0128 90 480 HSF AT1G67970 46.250 7.22e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Acco11g0128 HSF_DNA-bind 6.8e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0128 11 1413008 1422822 Acco11g0128 11 1413008 1422822 ECH