Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0124 ATGCAGCGAGAGGAACCTCTTCATCCTCCTCGCATCGTGACGATCTTGGTTGCCATTGATTTAGACACCGAAAAGTGTATTAGAGAGCAGCTTCCAGATTCGCTTTATGAAATCCTTGCAATCTCCTCTGTTAAGTTAGCCTTACAACTCTTACCAGGGTTAGACGTTGAATTGGTTCTAAGTAATGTCTCTTCGAAAGACGACGACGACGGCTACAATTTCATTGCCAAAGTGAAGTGCTTGAGAAGAAATATTACCCACGTTGTAATATTTGCGGAGAAAATATCTACGGAGTATGAATCGGACGAGATCATCAGGGCGTTTAAATCGGGCGTAAATTATGTTTTGTGGAAGCCAGTGAGTAAGCCGTCTGATGAAATTAGAAATTTATGGCAACATGTTTTTAGGGGGAGGGTTAAATTTGAGCCGCTGAATCATCAGAATGAGGGTTCTTTTTCTCCTGTTTCTACCCAACAAGAGAGTTTTAAAAGAAAAAACGAATTTGAGCCCCTGAATCATCAGAATGAGGGTTCTTTTTCTCCTGTTTCTTCCCAACAAGAGAGTTTTAAAAGAAAAAACGAATTTGAGCCCCTCAATCATCAGAATGAGGGTTCTTTTTCTCCTGTTTCTTCCCAACAAAAAAGTCTTAAAAGAGAAAACGAGTTTGAGCCACTGAATCAAGGTGAAGAATTAGAAGGTTCTTCAAAAAAACAACGTTTGGTTTGGGACAAGGATCTCCATGCCCGGTTTGTTAAAGCTATTAAAGCTCTGAAAGAACGTGGCAAACCTGTGGTGCCAACACAAATTCTTGAACAGATGAAACGGAATTGGGATAGGGATCTGCCTCCTCTGAATCTGACTACAGCACAAGTTGCAAGTCACCTACAGAAACACAGGGGAAAGGTGAAGGAGAAGGAAAAAGAGCTTCATCGACCAACACAGGGCATGGATAATGTAAATGGAAGGGATGCGACGACAATGAATCAAATCCCTCACCATGACAGGTCGCATCCCCAGGGCATGGATAATGCAAATGGAAGGGATGCGACGACAATGAATCAAATCCCTCACCATGACAGAAAATGGAGAGAATTGTTTCAATTCAAAGGAGACACATCTCATATTGAGAATGGAGTCTATAACTCGACTTCTATGCGTCAGTCTGAGCTAATGCCGCAACAGCCACACATAGCTCCAAACCCGAGCGATTGCTGGTCTGAAACGCTCTTGGATCATCCCGCCAATTTTGATAGGCTTCAGAAAGAGCACCTAAGTACTTTCATTGGAGGAAGTGATATGGTGCAAGCAGATCAAGCCTCCCTTCTTATTCCGAGTGGAGTCGATAACTTGACTTCTGTCAATCAGCCTGAGCCAATGCCGCAACAGCAACACATAGCTCCAAACCCGAGCGATTTCAGTGCCGATTGGGATTACTTTCAGGAACTTTATGTCTTTAATACCGATGGAGTGGAGTCAATAACTTGA 1485 0.429 MQREEPLHPPRIVTILVAIDLDTEKCIREQLPDSLYEILAISSVKLALQLLPGLDVELVLSNVSSKDDDDGYNFIAKVKCLRRNITHVVIFAEKISTEYESDEIIRAFKSGVNYVLWKPVSKPSDEIRNLWQHVFRGRVKFEPLNHQNEGSFSPVSTQQESFKRKNEFEPLNHQNEGSFSPVSSQQESFKRKNEFEPLNHQNEGSFSPVSSQQKSLKRENEFEPLNQGEELEGSSKKQRLVWDKDLHARFVKAIKALKERGKPVVPTQILEQMKRNWDRDLPPLNLTTAQVASHLQKHRGKVKEKEKELHRPTQGMDNVNGRDATTMNQIPHHDRSHPQGMDNANGRDATTMNQIPHHDRKWRELFQFKGDTSHIENGVYNSTSMRQSELMPQQPHIAPNPSDCWSETLLDHPANFDRLQKEHLSTFIGGSDMVQADQASLLIPSGVDNLTSVNQPEPMPQQQHIAPNPSDFSADWDYFQELYVFNTDGVESIT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0124 494 MobiDBLite consensus disorder prediction 216 237 - -
Acco11g0124 494 MobiDBLite consensus disorder prediction 297 322 - -
Acco11g0124 494 NCBIfam myb-like DNA-binding domain, SHAQKYF class 237 301 IPR006447 GO:0003677
Acco11g0124 494 SUPERFAMILY Homeodomain-like 235 303 IPR009057 -
Acco11g0124 494 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 172 464 IPR044841 GO:0003700|GO:0006355
Acco11g0124 494 MobiDBLite consensus disorder prediction 172 188 - -
Acco11g0124 494 MobiDBLite consensus disorder prediction 297 313 - -
Acco11g0124 494 MobiDBLite consensus disorder prediction 172 237 - -
Acco11g0124 494 SUPERFAMILY CheY-like 26 148 IPR011006 -
Acco11g0124 494 Gene3D - 15 140 - -
Acco11g0124 494 Gene3D - 234 304 - -
Acco11g0124 494 MobiDBLite consensus disorder prediction 199 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0124 Acco-ChrAcco11 1369531 1371594 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0124 70 341 Response Regulator Gene Family AT2G01760 23.529 3.26e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco11g0124 None None None