Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0122 ATGCAGCGATCTTCAGACCAACCTCGTCTTCCTCCTCCTTTTCAGGGCTTGAAGGTTCTCTTAGTAACCACTGATGATGCCATCCAAAGCTGTATCAAGAATCAGCTTTTACTTCCTCATTATCAAATCACTATACTTCACAGTTGTACTGTTGCGTTACAACTCTTAAAATATGATAACTTTGACTTGGTTCTTAGTGATTTCTCCTCTTTGAAAGACATGAATGGCTATCATTTTATCGCCCAAGTCCAAGTCGAGAGAAAAAATATTCGTCACGTTGTAATATTTGAAGCTGAGAGATTATCTCATGATGAGATCATCAGAGCGTATCAATCAGGTGCATGCTATATTTTGTGGAAGCCACTGAGTGAGCCGTTTGATGAGATTAAAAATTTATGGCAACATCCTTTTAGGTGTTGGGTTCAGAATGAGGGTTCTTCTTCTCAACTGGTTTCTTCCCAACAAGAAAGTCTAAAAAGAGGAAACAACTTTATAAACCATGACGAGGGTTCTTTGTCTCAGTTGGTTTCTTCCCAACAAAAAAGTCTAGAAAGGGGAAACAACTTTATAAATGATGACGAAGAACCTTCTTTAAAGAAGAGACAACGGTTCACCTGGACTGATGAACTTCATGCAAGGTTTGTTGAAGTTGTGAAACAACTTCAACAACTTGGTGAATTATCATCATCTTCGTACCAGCATCTTCCCCTTCTAGAAACTTCCACGACTAATTATCCTCCTCCTCCTCGACCCCTTCTAGAAACTTCCACGACTAATTATCCTCCTCCTCCTCCTCGACCCCAAAGGCGACGCCAGCGGCAGATACAACATCAACACCTTGCTTGCCAGCCAACGCAGTTCAACAACTTTGGTGCGGTGACATCTTTTATTGGGAATGGAGTCAATAACGTGATGACTTATGAGCAGCCTGATCGAAAGCTAGTTTTGCCTTTTCATGTTAATACTACCAGACCTCCGGGGCCTTTTCATGTTAATACTACCAGACCTCCGGGGCATCAGCCTGATCAAATCATAGGTGCTTCCTTTGAAAGTAAGGAAAGTAATATGCTGCAACAGTCACACACAGATCTAAACCTGCTGCAACAGTCACACACAGATCTAAACCTGCTACAACATTCATACACAGATCCAAACCTTTCTGGGCTGCAACAGTCACACACAGATCCAAACCTGACTTCTTGTTGTATGCTGCAACAGTCACACACAGCTCCAAACCTGACTTCTTGTTGTATGCTGCAACAGTCACACACAGCTCCAAACCTGACTTCTAGTATGGAACAACTACAACTAGATCATGACCTGACTTCTTGTATGCTGCAACAGTCACACACAAACCTGACTTCTAGCATGGAACAACTAAAACTAGATCAAGACCCAGTTTCTGGAATTATAAACCAAGACCAAGCCCTGGGAACTCCAATAGATCAAAACCTGGGAACTCCAATAGATCAAAACTGTTATCTGGGTACTTCCTTTGAAAAAGGTAATATGGAGCAACAACCGATAACTCATTTGACTTCCAGTACGCAACAACTAGATCAAAACCCAGGTACGCAGCAACTAGATCGAAACACATCTTCAATTTCTGGAATTATAAACCAAGATCAATCTCTGGGTACTCCCTTTGGAAGAAATGATATGGAGCAACTAAATCAAAACCATTTTCCGAGCACTTACTTTGAAGAAAGTAATGTGGAGCAACAGATGATAAATCAAAACCCCGGCACGCAGCAACTAGACCCATATTCAGATTATGGAATCATAAACCAAGATACTTTTTATTCCCCTGGTCATCATGATGGAATGATCACGCCAGAAGTAACAGATGCTGAGTATTGGGCTAGTCTTTTAAATTTTGATCAAGAGTTTGATGTTCAACCGTCTGATGGTCTTAATAATTTTCAAGATCGTCAAGGCTTCTTGTATGCTCACCAAGAGATGGATGCTCACCAAGAAATAGATGCTCATGTTCAACAGATGAACGAGAAGGAGCCATCGCATGCTCACCAAAAAACAGATGCTCATGTCCAAGAGATGAACGAGAAGGAGCCATCGCATGCTCACCAAGAAATAGATGCTCATGTCCAAGAGATGAACGAGAAGGAGCCATCACAGATTCGAGCTGATGATAGATTGGCCAAGGAGGCTCTAAACGTTGATGAGGGCATAGTAGTTTTACAGTCTCCTTCCAGATTGGCCAAGCTGCATTTAGTTGTTGATGGTAGCTCTTAG 2253 0.4177 MQRSSDQPRLPPPFQGLKVLLVTTDDAIQSCIKNQLLLPHYQITILHSCTVALQLLKYDNFDLVLSDFSSLKDMNGYHFIAQVQVERKNIRHVVIFEAERLSHDEIIRAYQSGACYILWKPLSEPFDEIKNLWQHPFRCWVQNEGSSSQLVSSQQESLKRGNNFINHDEGSLSQLVSSQQKSLERGNNFINDDEEPSLKKRQRFTWTDELHARFVEVVKQLQQLGELSSSSYQHLPLLETSTTNYPPPPRPLLETSTTNYPPPPPRPQRRRQRQIQHQHLACQPTQFNNFGAVTSFIGNGVNNVMTYEQPDRKLVLPFHVNTTRPPGPFHVNTTRPPGHQPDQIIGASFESKESNMLQQSHTDLNLLQQSHTDLNLLQHSYTDPNLSGLQQSHTDPNLTSCCMLQQSHTAPNLTSCCMLQQSHTAPNLTSSMEQLQLDHDLTSCMLQQSHTNLTSSMEQLKLDQDPVSGIINQDQALGTPIDQNLGTPIDQNCYLGTSFEKGNMEQQPITHLTSSTQQLDQNPGTQQLDRNTSSISGIINQDQSLGTPFGRNDMEQLNQNHFPSTYFEESNVEQQMINQNPGTQQLDPYSDYGIINQDTFYSPGHHDGMITPEVTDAEYWASLLNFDQEFDVQPSDGLNNFQDRQGFLYAHQEMDAHQEIDAHVQQMNEKEPSHAHQKTDAHVQEMNEKEPSHAHQEIDAHVQEMNEKEPSQIRADDRLAKEALNVDEGIVVLQSPSRLAKLHLVVDGSS 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0122 750 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 227 IPR045279 GO:0009736
Acco11g0122 750 SUPERFAMILY CheY-like 15 124 IPR011006 -
Acco11g0122 750 MobiDBLite consensus disorder prediction 239 277 - -
Acco11g0122 750 Pfam Response regulator receiver domain 19 123 IPR001789 GO:0000160
Acco11g0122 750 ProSiteProfiles Response regulatory domain profile. 18 135 IPR001789 GO:0000160
Acco11g0122 750 Gene3D - 197 243 - -
Acco11g0122 750 Gene3D - 12 137 - -
Acco11g0122 750 MobiDBLite consensus disorder prediction 242 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0122 Acco-ChrAcco11 1339835 1344863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0122 16 221 Response Regulator Gene Family AT2G25180 29.911 4.23e-15 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco11g0122 Response_reg 4.1e-08 CL0304