Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0111 ATGATGGAGAAACCCCAACTTGGTTTTGGGGTTTCTTTCATAATTTATCGTCTTATTTTGGTGCTATCTGTGGCGATTTTGGCCTTTTCTCAGTATGATGCAGAGGTGATGAACATTCTTAAGAAGGCGATCAATGCCCCGCCTAGTCTCGGATGGACGAACCCTGACGTTTGCCAATGGCGATGGGTGGATTGCAACGCTGGACACCGTGTCATTTCCATACAAATTGGGAACTTGAATTTGCAAGGTTTTCTTCCAAAAGAACTCGAGAATCTTTCGGAGTTGCAGCTATTTGAATGCCAACAGAATAATCTGACGGGTCAAGTTCCATATCTATCCAAGACGTTACAAAGATTTGTGATCCGAGATAACAAGTTCAGCTCCATCCCCAATGATTTCTTCAAGGGAATGACAATGTTGCAAGAAGTAAGAATTGGGGATAACCCATTTTCGCCATGGCCTTTTCCAAGTAGTCTTAAGGATAGTGTGGCACTCCAGACATTTGTGGCAGCAAATGCAAGTTTGGTTGGAAGGATCCCAGATTTTTTAGGCAGTATGCCAGGTTTAGTTTCTTTAGTCTTGAATTCTAATAGTCTTGAAGGTGGCCTGCCTGCCAGTTTTGCAAATAGTTCAATCGAGGAACTTTTATTGAATTCACAAAATGGGAACTATAAACTTAATGGCACAATTAAGGTGCTGCAGAACATGACATCCTTGAAACAAGTTTGGCTATATGGTAATTCATTTACAGGTCCAATACCAGACTTGTCAAACCATGATCAGCTATCTGATGTGAGTTTAAGGGACAACCAATTGGCCTGTGCTGTCCCATCTTCTCTTACGGCTCTTCCAAGTTTACAGGTTGTGAATTTGACTGACAATTTCCTTCAAGGGCCCATTCCAACATTTAAATCAGGTGTGGTTGTTGATATGTCTGGGATTAATCGGTTTTGCACAAACATCCCAAATCAGCAATGTAGTCCTCTTGTGAACGCCTTACTCTCTATTGTTCAACCTTTAGGATGTCCTGTGAAATTGGCTGAAAATTGGAAGGGCAATGATCCCTGTAATGGCACTTGGACAGGAATAGTGTGCTCTGGGGGAAACATTACAATTGTTAATTTTCAGGACATGGGCTTATCAGGCACGATTTCCCCAACTTTTGCTTCTCTCACCTCTCTGACGAGATTGCTTCTTGCCAATAATTCACTCTCAGCTCCTATACCAAATGAGCTCACTACCATGCCCAACCTACGAGAGCTAGATGTTTCAAACAACAATCTTGGAGGTCATGTACCATCTTTTCCTAAAAAAAGCATGATTATTAGAATAGATGGGAATCCTGATCTTGGAAAACCTCTTGAATCACCTAGCTCAAATTCTGGAGGTAATGGTATTAAGAAGAAACATCAACTTTCTATTTTCATTGGGGGCATTGGGGTTGGCTTAATGATTTTACTTCTTATACTAGTGATAGTGTCTTATATGTTGGTTAAAAAACTTAAGTATTTTGGCAAGTTTGGTGGTCTAATGATGAAGTTGGTACATCCTCATGATGGTGAAGTTGGAAAAGCTATGAAGATTTACGTTGAAGATGCTGGTGCTCCTAATCAAGCTGATGTTCAAGGTATGGTAATTCCAATTCAAGTACTGAAAGAAGTCACTAACAATTTTAGTAACGCGAACATACTTGGAAAGGGTGGTTTTGGCACTGTGTACAGAGGTGAACTACATGATGGAACAAAGATTGCAGTGAAAAGAATGGATTCAGGATTGTTGATGGAGAAGGGACTGAGTGAATTCCGAGCTGAAATCGCAGTGCTTACTCAAGCTCGGCACAAACATTTGGTGGCACTTCTAGGGTATTGCTTGAATGGAAATGAGAGGCTTCTTGTGTATGAATATATGTCCCAAGGAGCACTTAGTAAGCATTTGTTTACATGGAAAGAGAATGGATTGGAACCTCTGGATTGGACAAGAAGACTAAACATTGCCTTGGATGTAGCTAGAGGTGTTGAGTATCTGCATGCCTTGGCTCAACAAAGTTTTGTTCATAGAGATCTTAAGCCATCCAACATTCTTCTCGGAGATGATATGCAAGCGAAAGTATCAGACTTTGGATTAGTCCGGCTTGCTCCTGAAGGAAGAAATTCAGTTGAAACTAAGCTTGCTGGAACTTTTGGTTATCTCGCACCTGAGTACGCAGCAACTGGGCGTGTTACTACAAAGGTTGATGTGTATAGTTTTGGAGTAGTTCTGATGGAGATGATCACGGGGAGGAGAGTGCTTGACCATAGCCTACCAGAGGAAGACTTCCACTTGGTTATGTGGTTCCGACGAATGATGCAGAACAACAATTCGTCTCGAAAGGTCATTGATCCTATCATTAATGTAGATGATGAAGCAACCATGTGCAGCATTAGGACTGTCTCAGAATTGGCTGGCCTTTGCTGTGCAAATGAGCCTCATCATCGTCCCAACATGGGCTACATAGTGAACGTACTATCGCCTCTCATTCAGGCAGCGTGGAAGCCAATCATGGAGTCAAGTTCTGATGAGAGTGGTGGCAAGCATGGCATTGATCTTGATATGACTCTGCCTCAAGCACTTAGCATTTGGCAATCTTTGGAAGGACAAAGCAGTTCAATATTTGTCAAAGGATCTGCTTCTCAATCACTTGTCACCAAATAA 2691 0.4177 MMEKPQLGFGVSFIIYRLILVLSVAILAFSQYDAEVMNILKKAINAPPSLGWTNPDVCQWRWVDCNAGHRVISIQIGNLNLQGFLPKELENLSELQLFECQQNNLTGQVPYLSKTLQRFVIRDNKFSSIPNDFFKGMTMLQEVRIGDNPFSPWPFPSSLKDSVALQTFVAANASLVGRIPDFLGSMPGLVSLVLNSNSLEGGLPASFANSSIEELLLNSQNGNYKLNGTIKVLQNMTSLKQVWLYGNSFTGPIPDLSNHDQLSDVSLRDNQLACAVPSSLTALPSLQVVNLTDNFLQGPIPTFKSGVVVDMSGINRFCTNIPNQQCSPLVNALLSIVQPLGCPVKLAENWKGNDPCNGTWTGIVCSGGNITIVNFQDMGLSGTISPTFASLTSLTRLLLANNSLSAPIPNELTTMPNLRELDVSNNNLGGHVPSFPKKSMIIRIDGNPDLGKPLESPSSNSGGNGIKKKHQLSIFIGGIGVGLMILLLILVIVSYMLVKKLKYFGKFGGLMMKLVHPHDGEVGKAMKIYVEDAGAPNQADVQGMVIPIQVLKEVTNNFSNANILGKGGFGTVYRGELHDGTKIAVKRMDSGLLMEKGLSEFRAEIAVLTQARHKHLVALLGYCLNGNERLLVYEYMSQGALSKHLFTWKENGLEPLDWTRRLNIALDVARGVEYLHALAQQSFVHRDLKPSNILLGDDMQAKVSDFGLVRLAPEGRNSVETKLAGTFGYLAPEYAATGRVTTKVDVYSFGVVLMEMITGRRVLDHSLPEEDFHLVMWFRRMMQNNNSSRKVIDPIINVDDEATMCSIRTVSELAGLCCANEPHHRPNMGYIVNVLSPLIQAAWKPIMESSSDESGGKHGIDLDMTLPQALSIWQSLEGQSSSIFVKGSASQSLVTK 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0111 896 PANTHER OSJNBA0070M12.3 PROTEIN 18 881 - -
Acco11g0111 896 Pfam Protein tyrosine and serine/threonine kinase 562 833 IPR001245 GO:0004672|GO:0006468
Acco11g0111 896 Pfam Leucine Rich Repeat 417 435 IPR001611 GO:0005515
Acco11g0111 896 ProSiteProfiles Protein kinase domain profile. 558 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0111 896 CDD STKc_IRAK 564 838 - -
Acco11g0111 896 Gene3D Ribonuclease Inhibitor 30 323 IPR032675 -
Acco11g0111 896 SMART serkin_6 558 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0111 896 SUPERFAMILY Protein kinase-like (PK-like) 547 845 IPR011009 -
Acco11g0111 896 SUPERFAMILY L domain-like 39 441 - -
Acco11g0111 896 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 636 848 - -
Acco11g0111 896 FunFam Leucine-rich repeat receptor-like kinase 328 453 - -
Acco11g0111 896 Gene3D Transferase(Phosphotransferase) domain 1 636 854 - -
Acco11g0111 896 FunFam Receptor-like kinase TMK4 31 323 - -
Acco11g0111 896 FunFam receptor-like protein kinase FERONIA 525 635 - -
Acco11g0111 896 ProSitePatterns Protein kinases ATP-binding region signature. 564 586 IPR017441 GO:0005524
Acco11g0111 896 Pfam Leucine rich repeat N-terminal domain 332 366 IPR013210 -
Acco11g0111 896 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Acco11g0111 896 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Acco11g0111 896 Gene3D Phosphorylase Kinase; domain 1 525 635 - -
Acco11g0111 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0111 Acco-ChrAcco11 1223543 1226861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0111 71 835 Receptor kinase-like Gene Family AT5G07280 30.359 4.10e-84 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Acco11g0111 PK_Tyr_Ser-Thr 5e-47 CL0016