Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0110 ATGGAGAAACCCCAAATCGGTTTTGGGGTTTCTTTTATAATTTATCGTCTCATTTTGCTGTTGTCTGTGGTGATTCCGGCTTTGTCTCAGAATGATGCAGCGGTGATGAACATTCTTAAGAAGGCGATCAATGCCCCACCTAGTCTCGGATGGACGGACACGGACGTATGCAAATGGCAGCGTGTGGATTGCAACTCTGGGAAACGTGTCATTTCCGTCCAGATTGGGAACTTGAATTTGCAAGGCATGCTTCCGAAGGAACTCGAGAATCTCTCCGAGTTGCAAAAATTTGATTGTCCACAGAACGGTTTGACAGGTCCAATTCCATATCTATCCAAGACACTGCAAAGACTTGTGATCCGAGATAACAAGTTCAGCTCCATCCCAAATGATTTCTTTAAAGGGATGACAATGTTGCAGGAAGTAAGAATCGGAAATAACCCATTTTCACCATGGTCTATCCCAGATAGTCTCGGGGATTGCGTGGAGCTCCAGACATTTGTGGCAACAAATACGAGTTTGGTTGGAAGGATCCCAGATTTTTTAGGCTCTATGCCAGGTTTAGTTTCTTTACTAATAAATTCTAATAGTCTTGAAGGTGGCTTGCCTAACAGCTTTGCGAAAAGTCCAATTGAGGAACTCTGGTTGAACAGTCAAAATGGTAACAATAAACTTAATGGCACACTTAGGGTGCTGCAGAACATGACATCCTTAAAACAAATTTGGCTACATGGTAATTCATTTACAGGTCCAATACCAGACTTGTCAAACCATGATCAATTGTCCGATGTGAGTGTAAGGGACAACCAATTGGCTTGTGCTGTCCCATCTTCTCTTATGGCTCTTCCAAGTTTACAGGTTGTGAATTTGACCAACAATCTCCTTCAAGGGCCCATTCCAACATTTAAATCAGGTGTAATTGTTGATATGTCTGGGATTAATCGGTTTTGCACAAACATCCCAAATCAGCCATGTAGTCCTCTTGTGAGTGCTTTACTTTCTGTTATTGAACCCTTAGGCTGTCCTGTGAAATTGGCTGAAAATTGGAAGGGCAATGATCCCTGTAATGGTAGTTGGACGGGAATAGTGTGCTCTGGGGGTAACATTTCAATTATCAATTTTCAGAACATGGGCTTGTCAGGCACTATTTCTCCTAATTTTGCCTCACTTACTTCTGTTTCAGAATTACTTCTTGCTAATAATTCACTCTCGGGTCCTATACCAAGTGGGCTCACTACAATGCCCAATTTAAAAAAGTTAGATGTTTCAAATAACAATTTGGGAGGTTATGTGCCAACTTTTCGTCAACCAGGTATTGATCTTAAAACAGAAGGGAATCCTGATCTTGGAAAACCTCTTAAATCACCTAGTGGCTCAGATTCTGATGGAGGCAATGGTGGCCATGAGAATAACAATCTCATTGCAATCATTGCTGGCATTGTGGTTGGCTTAGTGATTTTACTTACTATAGCAACTATTGTGTTCCTTAGATTTGTTAAAAAACGTAATTATTCGGGCAAGCTTGGAGGGCTAATAGCGAAGCTAAAACATCGCCATGGTGGTGGATCTGGAAAAGGTATGAAGATTAACGTTTCAGGTTCTAGTGCAGCTGGTCAAGCTGATGTCCAAGGTATGGTTATTCCAATTGAAGTTCTGAGAGAAGTCACTAACAATTTCAATAGTGATAACATACTAGGAAAAGGTGGTTTTGGCACTGTGTACAAAGGTGAAATGCAAAATGAAACAAAGATCGCAGTGAAGAGGATGGAATCAGGATTGTTGATGGAGAAGGGATTGAGTGAATTCCGAGCTGAAATCGCGGTGCTTACTCAAGCTCGACACAAACATTTGGTGTCACTTCTGGGATATTGCCTGGATGGAAATGAGAAGATTCTTGTGTATGAATACATGCCCCAAGGAGAACTTAGTAAGCATTTGTTTAGCTGGAAAGAGAATGGATTGAAACCTTTGGATTGGACAAGAAGACTAAACATTGCCTTGGATGTAGCTAGAGGTGTTGAGTATCTTCACACCTTAGCTCAACAAAGTTTTATTCATCGAGATCTTAAGCCATCCAATATTCTTCTCGGAGATGATATGCGAGCTAAAGTATCAGACTTTGGATTAGTCCGGCTTGCTCCTGAAGGAAGAAATTCAGTTGAAACTAGGCTTGCTGGAACTTTCGGATATCTCGCACCTGAGTACGCAGCAACTGGGCGAGTGACAACAAAGGTTGATGTGTATAGTTTTGGAGTAATCCTGATGGAGTTGATAACGGGGAGGAGAGTGCTTGACGACAGCTTACCTGAGGAAGACTTCCACCTAGTAACATGGTTCCGACGAAGGATGCAGAACAATGATGAGTCACTAGGAAAGGTCATTGATGCAAGCATTGATGCTGATGATGAAGAAACCATGTGGAGTATAAGGACTGTTTCGGGGTTGGCTGGGTATTGCTGTGCAAACGAGCCTCATCAACGACCTGACATGGGGCATGTGGTGAATGTGCTATCGCCTCTGGTTCAGGCATGGAAGCCGCAGGAGGGTGGTGAGGATGTCAAGTACGGGATTGACTTGGATATGAGTTTGCCTCAAGCACTCAGAAAGTGGCAGTCTTGTGAAGGAAAGACCACAACAATTGATTATGGATCAGGTTCTCAATCTTTTGTCACAAAATAA 2679 0.424 MEKPQIGFGVSFIIYRLILLLSVVIPALSQNDAAVMNILKKAINAPPSLGWTDTDVCKWQRVDCNSGKRVISVQIGNLNLQGMLPKELENLSELQKFDCPQNGLTGPIPYLSKTLQRLVIRDNKFSSIPNDFFKGMTMLQEVRIGNNPFSPWSIPDSLGDCVELQTFVATNTSLVGRIPDFLGSMPGLVSLLINSNSLEGGLPNSFAKSPIEELWLNSQNGNNKLNGTLRVLQNMTSLKQIWLHGNSFTGPIPDLSNHDQLSDVSVRDNQLACAVPSSLMALPSLQVVNLTNNLLQGPIPTFKSGVIVDMSGINRFCTNIPNQPCSPLVSALLSVIEPLGCPVKLAENWKGNDPCNGSWTGIVCSGGNISIINFQNMGLSGTISPNFASLTSVSELLLANNSLSGPIPSGLTTMPNLKKLDVSNNNLGGYVPTFRQPGIDLKTEGNPDLGKPLKSPSGSDSDGGNGGHENNNLIAIIAGIVVGLVILLTIATIVFLRFVKKRNYSGKLGGLIAKLKHRHGGGSGKGMKINVSGSSAAGQADVQGMVIPIEVLREVTNNFNSDNILGKGGFGTVYKGEMQNETKIAVKRMESGLLMEKGLSEFRAEIAVLTQARHKHLVSLLGYCLDGNEKILVYEYMPQGELSKHLFSWKENGLKPLDWTRRLNIALDVARGVEYLHTLAQQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGRNSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVILMELITGRRVLDDSLPEEDFHLVTWFRRRMQNNDESLGKVIDASIDADDEETMWSIRTVSGLAGYCCANEPHQRPDMGHVVNVLSPLVQAWKPQEGGEDVKYGIDLDMSLPQALRKWQSCEGKTTTIDYGSGSQSFVTK 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0110 892 FunFam Leucine-rich repeat receptor-like kinase 327 452 - -
Acco11g0110 892 SUPERFAMILY Protein kinase-like (PK-like) 544 845 IPR011009 -
Acco11g0110 892 MobiDBLite consensus disorder prediction 438 466 - -
Acco11g0110 892 Pfam Protein tyrosine and serine/threonine kinase 562 835 IPR001245 GO:0004672|GO:0006468
Acco11g0110 892 FunFam Receptor-like kinase TMK4 30 322 - -
Acco11g0110 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 684 696 IPR008271 GO:0004672|GO:0006468
Acco11g0110 892 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Acco11g0110 892 Pfam Leucine rich repeat N-terminal domain 346 365 IPR013210 -
Acco11g0110 892 Gene3D Phosphorylase Kinase; domain 1 526 636 - -
Acco11g0110 892 ProSiteProfiles Protein kinase domain profile. 559 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0110 892 Gene3D Ribonuclease Inhibitor 328 452 IPR032675 -
Acco11g0110 892 PANTHER OSJNBA0070M12.3 PROTEIN 17 877 - -
Acco11g0110 892 SUPERFAMILY L domain-like 39 434 - -
Acco11g0110 892 CDD STKc_IRAK 565 840 - -
Acco11g0110 892 Gene3D Ribonuclease Inhibitor 29 321 IPR032675 -
Acco11g0110 892 FunFam receptor protein kinase TMK1 637 856 - -
Acco11g0110 892 Gene3D Transferase(Phosphotransferase) domain 1 637 855 - -
Acco11g0110 892 SMART serkin_6 559 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0110 892 FunFam receptor-like protein kinase FERONIA 525 636 - -
Acco11g0110 892 ProSitePatterns Protein kinases ATP-binding region signature. 565 587 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0110 Acco-ChrAcco11 1217619 1220868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0110 46 840 Receptor kinase-like Gene Family AT5G65700 31.780 2.73e-86 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Acco11g0110 PK_Tyr_Ser-Thr 2.2e-46 CL0016