Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0109 ATGGTGGTTGAGGCATTTTGCTGTGAGGTTACGACTACGAGGGAAACTCCGCGTAAGTTGAGCAATGCAGAGTGTTTTCTGTTCAGAGCGGTCCGCGCCATTGTAGGAGATGATGCAGTCAGAGTCAAGTGTAAGAAGTTGAAGGATTCGCTTGACATGGGTGAGGAGGTTAAGGCTATCGTTCCAGAGTCTGTCTTGAAGAAGCAGAAGAGGGAAGAGGAATGGGCACTGGCCAAAACACAGGAGCTTGAAGCTGCCAAGAAGAAGAGGGCAGAGAGCCGTAAGTTGATTTACAACAGAGCTAAGCTGTACGACAAGGAGTATAAGGAACGAGAGAAGGAATTAATTAGACTGAAACGTGAGGCAAAGCTTAAAGGTGGATTTTATGTTGATCCAGAAGCTAAACTTCTATTTATCATTCGCATTCGTGGTATCAATGCCATGCACCCAAAGACCAGGACGATCTTGCAGCTATTGCGTTTGAGACAGATCTTCAATGGTGTATTCCTTAAAGTTAACAAAGCCACAATGAACATGCTGCACAGAGTTGAACCTTATGTGACTTATGGATACCCAAATCTTAAGAGTGTTAGAGAACTTATTTACAAGAGGGGTTACGGTAAGCTCAACAAGCAGAGAATTGCTTTAACTGACAACTCTGTCATCGAGCAGGCACTGGGCAAGCATGGAATCAACTGCGTTGAAGATCTTGTCCATGAGATCATAACAGTTGGGCCCCACTTTAAGGAGGCCAACAACTTCCTTTGGCCATTTAAGCTGAAAGCTCCTTTGGGTGGATTGAAGAAGAAGAGAAACCACTATGTTGAAGGAGGGGATGCAGGAAACAGAGAGAATTACATTAATGAGCTTATCAGGAGAATGAATTAG 888 0.4414 MVVEAFCCEVTTTRETPRKLSNAECFLFRAVRAIVGDDAVRVKCKKLKDSLDMGEEVKAIVPESVLKKQKREEEWALAKTQELEAAKKKRAESRKLIYNRAKLYDKEYKEREKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRTILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRIALTDNSVIEQALGKHGINCVEDLVHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0109 295 Coils Coil 101 121 - -
Acco11g0109 295 Pfam Ribosomal protein L30p/L7e 137 187 IPR016082 -
Acco11g0109 295 NCBIfam 60S ribosomal protein uL30 62 295 IPR005998 GO:0000463|GO:0003735|GO:0022625
Acco11g0109 295 SUPERFAMILY Ribosomal protein L30p/L7e 136 295 IPR036919 -
Acco11g0109 295 Gene3D - 240 295 IPR036919 -
Acco11g0109 295 Gene3D - 136 239 IPR036919 -
Acco11g0109 295 ProSitePatterns Ribosomal protein L30 signature. 155 187 IPR018038 -
Acco11g0109 295 PANTHER 60S RIBOSOMAL PROTEIN L7 59 295 IPR039699 -
Acco11g0109 295 FunFam 60S ribosomal protein L7 241 295 - -
Acco11g0109 295 CDD Ribosomal_L7_archeal_euk 136 295 IPR035808 -
Acco11g0109 295 Pfam Ribosomal L30 N-terminal domain 61 132 IPR012988 -
Acco11g0109 295 FunFam 60S ribosomal protein L7 136 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0109 Acco-ChrAcco11 1212031 1217311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0109 56 295 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.000 3.25e-154 429