Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0102 ATGAAAGAGAAAATAGGGAAAGGGGAAAGAGAAAAATTTTTATCCCAAACTTACGAGCTTAGCTCTTTCAATTTGGCGGGGTTGACCGCGAAGGCGACTCCGTGTTCTGTCCCGCCCAAACCAAACGGTCAAACTCGCTTCTGTGGAAACGCCGGCCGCTACTCCGAACTAGACTCACTCTCTCCGACCATGGTTGCTCTCGCCGCTCTCAGATCTTCAAAGTTCATCTCATGGAAACCGACTGGCAGGCTTCAGCAAACTTTAGCTAGCTGTGTAGAGCGGCGAGGTAATACTTTACACTCTGGAAAGGCTTCAGTAGTCAAACTCTGTCCTGGATTTGCAGGAGAAGGGAGGTATTTCTATTTCCGGTCCAATTTGATACCAGCATCGATTGATTATGCTCATGAATCGCCGCTCTGTACCACATTGTGTAAAGATGGTTTTAGAGTACGGACTGTTGAGCACTTGCTGTCTGCTTTGGAGGCGACTGGTGTTGATAATTGCAGAATTGAGATACAAAATTTGGATACTGAAGGAGATTGTGCTGAGATCCCTATATTTGATGGGTCAGCTAGTGAATGGGTTGCAGCAGTGGAAGAAGTTGGTTTAAAGGTGGCAACTGATCACCATGGCGATAGTTGTGAAAAATTAGCTCCACATCTGAATGAACCAACGTTTGTGTTTAGGAATGATTCTTTTGTTGCTGCATTTCCTTCAACAATGATTCAAATGACTTATGGAATTAACTTTCCACAGGCAAGTTCTATTGGATGCCAGTGGTTTTCAACCCCTGTGGACAATTTGCTTTATTCCAAACAGATAGCTTTTTCAAGAACCTTCTGCATTTATGAAGAGATTGAACAAATGCGCAATGCTGGGCTGATTAAAGGAGGTAGTCTAGAAAATGCCATTGTTTGCAGTGTCCATAAAGGTTGGTTGAATCCACCTTTGCGTTTCAATGATGAACCGAGCCGTCATAAAGTCCTAGATCTTATAGGAGATCTTTCCCTTTTTGCTCAGTCTGGGAATCAAGGAGTTCCAGTGGCACACATTGTCGCTTACAAGGGTGGCCATGCATTGCATGCTGATCTGGTACGTCGCCTTATTGGGTCCATTTGA 1119 0.4433 MKEKIGKGEREKFLSQTYELSSFNLAGLTAKATPCSVPPKPNGQTRFCGNAGRYSELDSLSPTMVALAALRSSKFISWKPTGRLQQTLASCVERRGNTLHSGKASVVKLCPGFAGEGRYFYFRSNLIPASIDYAHESPLCTTLCKDGFRVRTVEHLLSALEATGVDNCRIEIQNLDTEGDCAEIPIFDGSASEWVAAVEEVGLKVATDHHGDSCEKLAPHLNEPTFVFRNDSFVAAFPSTMIQMTYGINFPQASSIGCQWFSTPVDNLLYSKQIAFSRTFCIYEEIEQMRNAGLIKGGSLENAIVCSVHKGWLNPPLRFNDEPSRHKVLDLIGDLSLFAQSGNQGVPVAHIVAYKGGHALHADLVRRLIGSI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0102 372 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 85 369 IPR004463 GO:0008759|GO:0009245
Acco11g0102 372 SUPERFAMILY Ribosomal protein S5 domain 2-like 84 204 IPR020568 -
Acco11g0102 372 Gene3D lpxc deacetylase, domain 1 83 210 IPR015870 GO:0008759|GO:0009245
Acco11g0102 372 SUPERFAMILY Ribosomal protein S5 domain 2-like 224 369 IPR020568 -
Acco11g0102 372 Gene3D lpxc deacetylase, domain 2 220 371 IPR011334 GO:0008759|GO:0009245
Acco11g0102 372 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 66 370 IPR004463 GO:0008759|GO:0009245
Acco11g0102 372 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 85 369 IPR004463 GO:0008759|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0102 Acco-ChrAcco11 1153088 1157879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0102 72 368 Carbohydrate Esterase AT1G25054 62.752 1.18e-139 398