Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0094 ATGGCTGCTTCCAAGGCGTTAATGGCTTCCTTAACCCACCTTCGTCCACTAACATGCGCTGCTTCTGCATCAACATCTTATCCTACGCGACTTGTGCCCCAACCACCCGACCTCATCAAATGGGTTCGGAAACAAGGTGGTTTCGTGCACACGGCGGTGAAGATAGCACAAGATGAGTACAAAGGCCTTGGACTTATGGCTTCGGAAGAAATCCCTAGAGGCAGTGACCTTATTGTTCTTCCGCATCACGTACCCTTGAGGTTTGGTTCTCTTGAACCGAATGATGAAGATGAGCTTGATTCTGTGTTAGTTAATTTAGCTCGCCATGTTCCTGAGGAACTATGGGCTATGAAACTGGGTTTAAAGCTTCTGCAAGAAAGAGCGAAAGTGGGATCGTTTTGGTGGCCATATGTCAGCAATCTCCCGGAAACATACAGTGTGCCTATCTTCTTTGCAGGGGAGGATATAAAGAATTTGCAGTATGCTCCACTGCTTCACCAGGTAAACAAAAGATGCCGTTTTCTTCTTGATTTTGAGCAAGAGTGCAGGCGTGCCCTTGACAATGTGGAACCAGATAAGCATCCTTTTGGTGGACAAGAGGTAGATGCGTCTACACTTGGATGGGCAATGTCAGCAGTCTCATCTAGGGCATTCCGGTTATATGTTGACAAGCATCCGGATGGGGCTCACACAGAAATACCAATGATGCTTCCTCTAATTGATATGTGCAATCATAGTTTCAATCCTAATGCCCGAATTGTTCAGGAAAAAGATACTGCTACAATGAAGATGCTGGTAAAGGTCGTGGCTGATACAGAAATCAAACAAGATGATCCTTTATTACTCAATTATGGCTTTTTAAGCAATGATTTTTTCCTTCTTGATTATGGATTTGTGGTACCCTCAAGTCCTTATGACCGTATTGAGCTCAAATATGATAGTGCATTTTTGGATGCTGCAAGCATGGCAGCTGGGGTTTTTTCTGCCAACTTCTCAGCACCTGCTTCATGGCAGGAACAAATTTTATGTCAACTAAATCTAGCTGGAGAAGCTCCTGATCTCAAGGTAACCTTAGGTGGTCAAGAAATAGTAGATGGCCGGCTATTGGCAGCACTGAGAGTACTTCTTACAAGTGACGAGGAGGATGTGCAGAACTGTGACCTTAACACTCTCAAGTCTCTAACTGCTGAAGCTCCTCTTGGAATTGCAAATGAAGTGGCAGCCCTGCGAACAACAATTGCTTTATGTGTCATTGCATTGGGGCACTTCCCCACTAAGATAATGGATGACGAGACATTATTGAAACAGGGTGCTTCAGGTTCAACTGAGCTAGCGATTCAGTTCAGGATTCAAAAGAAATATGTGATTATAGATGTGATGAGAGATCTAACGAGAAGGGTGAAGCTTCTCTCATCAAAGGAAAAGGCCACTGCTGAAAGTTAA 1443 0.4421 MAASKALMASLTHLRPLTCAASASTSYPTRLVPQPPDLIKWVRKQGGFVHTAVKIAQDEYKGLGLMASEEIPRGSDLIVLPHHVPLRFGSLEPNDEDELDSVLVNLARHVPEELWAMKLGLKLLQERAKVGSFWWPYVSNLPETYSVPIFFAGEDIKNLQYAPLLHQVNKRCRFLLDFEQECRRALDNVEPDKHPFGGQEVDASTLGWAMSAVSSRAFRLYVDKHPDGAHTEIPMMLPLIDMCNHSFNPNARIVQEKDTATMKMLVKVVADTEIKQDDPLLLNYGFLSNDFFLLDYGFVVPSSPYDRIELKYDSAFLDAASMAAGVFSANFSAPASWQEQILCQLNLAGEAPDLKVTLGGQEIVDGRLLAALRVLLTSDEEDVQNCDLNTLKSLTAEAPLGIANEVAALRTTIALCVIALGHFPTKIMDDETLLKQGASGSTELAIQFRIQKKYVIIDVMRDLTRRVKLLSSKEKATAES 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0094 480 ProSiteProfiles SET domain profile. 51 285 IPR001214 GO:0005515
Acco11g0094 480 CDD SET_LSMT 52 299 - -
Acco11g0094 480 Gene3D - 335 477 IPR036464 -
Acco11g0094 480 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 22 442 - -
Acco11g0094 480 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 295 475 IPR036464 -
Acco11g0094 480 Gene3D set domain protein methyltransferase, domain 1 6 298 - -
Acco11g0094 480 FunFam SET domain containing protein 321 474 - -
Acco11g0094 480 SUPERFAMILY SET domain 33 302 IPR046341 -
Acco11g0094 480 Pfam SET domain 62 285 IPR001214 GO:0005515
Acco11g0094 480 Pfam Rubisco LSMT substrate-binding 334 455 IPR015353 -
Acco11g0094 480 FunFam Histone-lysine N-methyltransferase setd3 3 298 - -
Acco11g0094 480 SMART set_7 51 291 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco11g0094 SET 3.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0094 11 1081045 1084780 Acco11g0094 11 1081045 1084780 ECH