Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0080 ATGGGTGCCCCCTCACCTCCTTCTTCATTTGCACCACTTCATCATCAAACCCTACTGATTCTTCACACAATGGCTGCTCCTCTGAACAAACTCGTTTCTTCCATCTTCCTCCTCTTCCTCCTCCTTCTGGCCGCAGGGATGGGGCCAAGAATGGTGGCAGAAGCAAGGACCTGTGAGTCAAACAGCCAACGCTTCAGAGGAGTGTGTGTGAGGTCCTCAAACTGTGCCTCCGTCTGCCAGTCGGAGGGCTTCTCCGACGGCCACTGCCGCGGCTTCCGCCGCCGTTGCTTCTGCAGCAAACCGTGTTGA 309 0.5631 MGAPSPPSSFAPLHHQTLLILHTMAAPLNKLVSSIFLLFLLLLAAGMGPRMVAEARTCESNSQRFRGVCVRSSNCASVCQSEGFSDGHCRGFRRRCFCSKPC 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0080 102 PRINTS Purothionin signature 57 72 IPR008176 GO:0006952
Acco11g0080 102 PRINTS Purothionin signature 87 101 IPR008176 GO:0006952
Acco11g0080 102 CDD Knot1 67 98 IPR003614 GO:0006952
Acco11g0080 102 ProSitePatterns Gamma-thionins family signature. 56 79 IPR008176 GO:0006952
Acco11g0080 102 Gene3D - 56 102 IPR036574 -
Acco11g0080 102 SUPERFAMILY Scorpion toxin-like 56 102 IPR036574 -
Acco11g0080 102 SMART gth_4 57 102 IPR003614 GO:0006952
Acco11g0080 102 Pfam Gamma-thionin family 56 102 - -
Acco11g0080 102 PANTHER DEFENSIN-LIKE PROTEIN 1 34 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0080 Acco-ChrAcco11 963069 963855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0080 30 102 Plant Defensins Gene Families AT2G02100 57.534 3.64e-29 98.6