Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0075 ATGGAGATCTTCTTTTCTCTTGCGCTAAGGATCAGAACCCCACCGTCTGGTTCGCCGACAACGGTGAACGCTTGGGCACTTATCGTGGTCACAACGGCGCTGTTTAGTCCTGTGATGTCTCAAGCAAGAGATTCAAGGCGTCTTATAACGGGAAGTGCAGATCAGACAGCAAAGCTATGGAATGTTCAAAATGGGCAGCAGTTGTTCACTTTCAATTTTGATTCTCCTGCTAGGTCTGTGGATTTCGCTGTGGGAGACAAACTTGCTGTTATTACAACTGATCCCTTCATGGAATTGTCCTCTGCAATTCATGTCAAACGCATTGCTAGAGACACCAGTGACCAGTCTGGCGAATCTATACTTGTCATTAAAGGCCCTCAGGGAAGAATAAACAGAGCCATTTGGGGGCCACTAGACAAAACCATTATTAGTGCTGGAGAAGATGCAGTGATTCGTATATGGGATTCTGAGACTGGAAAGCTACTTAAGGAGGCAAACAAGGAATCTGGCCACAAAAAGACAATAACGTCTCTTGCAAAATCCGCTGATGGTTCCCATTTTTTGACTGGCTCCCTTGATAAATCGGCGAAGCTTTGGGATGCCAGATCTTTGTCTCTTATCAAGACATATGTAACAGAACGCCCAGTCAATGCAGTGGCCATGTCACCTCTACTTGATCATGTGGTGATTGGAGGTGGTCAAGACGCTTCAGCTGTTACTACTACTGATCATCGTGCTGGAAAATTCGAAGCCAAGTTTTTTGATAGGATTCTTCAAGGAGAAATTGGGGGTGTGAAGGGACATTTTGGACCAATTAATGCACTTGCCTTTAACCCTGATGGCAAGAGCTTTTCAAGTGGAGGTGAAGATGGTTATGTAAGGTTGCATCACTTTGACCCTGACTACTTCAATATTAAAATTTAG 924 0.4448 MEIFFSLALRIRTPPSGSPTTVNAWALIVVTTALFSPVMSQARDSRRLITGSADQTAKLWNVQNGQQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELSSAIHVKRIARDTSDQSGESILVIKGPQGRINRAIWGPLDKTIISAGEDAVIRIWDSETGKLLKEANKESGHKKTITSLAKSADGSHFLTGSLDKSAKLWDARSLSLIKTYVTERPVNAVAMSPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDRILQGEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0075 307 PRINTS G protein beta WD-40 repeat signature 142 156 IPR020472 -
Acco11g0075 307 PRINTS G protein beta WD-40 repeat signature 48 62 IPR020472 -
Acco11g0075 307 PRINTS G protein beta WD-40 repeat signature 187 201 IPR020472 -
Acco11g0075 307 Gene3D - 29 307 IPR015943 GO:0005515
Acco11g0075 307 SUPERFAMILY WD40 repeat-like 30 303 IPR036322 GO:0005515
Acco11g0075 307 ProSiteProfiles Trp-Asp (WD) repeats profile. 123 164 IPR001680 GO:0005515
Acco11g0075 307 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 265 295 - -
Acco11g0075 307 ProSiteProfiles Trp-Asp (WD) repeats profile. 168 209 IPR001680 GO:0005515
Acco11g0075 307 Pfam WD domain, G-beta repeat 169 200 IPR001680 GO:0005515
Acco11g0075 307 Pfam WD domain, G-beta repeat 265 295 IPR001680 GO:0005515
Acco11g0075 307 ProSitePatterns Trp-Asp (WD) repeats signature. 142 156 IPR019775 -
Acco11g0075 307 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 123 160 - -
Acco11g0075 307 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 43 306 - -
Acco11g0075 307 ProSiteProfiles Trp-Asp (WD) repeats profile. 265 295 IPR001680 GO:0005515
Acco11g0075 307 SMART WD40_4 203 242 IPR001680 GO:0005515
Acco11g0075 307 SMART WD40_4 158 200 IPR001680 GO:0005515
Acco11g0075 307 SMART WD40_4 20 61 IPR001680 GO:0005515
Acco11g0075 307 SMART WD40_4 258 297 IPR001680 GO:0005515
Acco11g0075 307 SMART WD40_4 116 155 IPR001680 GO:0005515
Acco11g0075 307 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 168 203 - -
Acco11g0075 307 ProSiteProfiles Trp-Asp (WD) repeats profile. 44 70 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0075 Acco-ChrAcco11 898375 901482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0075 42 307 Eukaryotic Initiation Factors Gene Family AT2G46290 76.866 2.52e-152 429