Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0064 ATGAACTTCACCATGTCTCTCCCAAAACCACCACTACCCTCTGGTATCTCATTTGCTTCTCGCCTTGCTACACGCTCTCTTCCCCGGTGGAGCTTGCCGGAGAAGGCGATGCCGAAGGAGGTGGCGTACCAGAACATCCACGACGAGCTCCAGCTGGACGCCAATCCGAAACTGAACTTGGCGTCGTTCGTGACCACTTCCATGGAGGAAGAATGCAACAAGCTCATCATGGAATCCATTAACAAGAATTACGTTGACATGGACGAGTACCCTATCACCACTGACCTTCACAATCGATGCGTGAACATAATAGCAAGTTTGTTCAATGCTCCGATGGAAGAAGGTGAATGCGGTGTGGGAGTGGGGACGGTTGGATCATCGGAAGCGATAATGCTGGCGGGGTTGGCTTTTAAGAAGAAATGGCAAAACATGAGGAGGGCTCAAGGAAAGCCTTTCGACAAGCCTAACATTGTAACTGGCTCCAATGTTCAGGTGTGTTGGGAGAAATTTGCTAGGTATTTTGAGGTGGAGCTGAAGCAAGTGAAGGTGAGGGAAGGGGACTACGTGATGGATCCACAAAGAGCAGTGGAAATGGTGGACGAAAACACAATTTGTGTTGCAGCAATTCTGGGTTCTACTTACAATGGCGAGTTTGAAGACGTTAAGCTCTTGAACGACCTTCTTCAACAAAAGAACAAGCAAATAGGGTGGGATACACCGATTCATGTGGATGCGGCGATTGGAGGGTTTGTTGCACCATTTTTGTACCCAGAGTTAGAGTGGGATTTTAGGCTGCCATTGGTGAAGAGTATCAATGTGAGTGGCCACAAGTATGGATTGGTGTATGCTGGTGTTGGTTGGGTTCTATGGAGGACCAAACAAGACTTGCCTCAAGATCTTGTCTTCCACATCAATTATCTTGGAGCTGATCAGCCCACTTTCACCCTCAATTTTTCTAAAGGTTCTAGCCAGATTATCGCCCAGTATTATCAGCTAATTCGCCTAGGCAAAGAGGGCTACCGTAATGTGATGGAGAACTGTAGAGAAAACTCAAAGGTTGTAAAGGAAGGAATAGTAAACACAGGATGCTTCAACATACTTTCCAAGGACAACGGCGCTCCTGTGGTGGCATTCTCCCTCAAGGACAGAAGCCGTCACGACGAGTTCAAGATCTCAGCCATGCTCCGCCGCCACGGTTGGATTGTGCCAGCATACCCGATGCCGCCCGGTGCCGACCACATCACCGTGCTGCGTGTCGTCATCAGGGCCGAGTTCTCTCGCACATTGGCTGAACGTCTTGTGATGGACATCACAAATGTGCTGCATCAACTTGAAATGCTTCCTCATCAATACATTAATGATCATCACGAGGCAACTATGAATAATGATCACAATAATATTGAAGGAGTGAAGAAGAGGATTACTTCGTCGGAGGCGGTTCGAAGAAAAATCATTGCTCAAGAAGCTAAAAGGCGCCAAAAAATCTTGGCTGCCTAA 1497 0.4776 MNFTMSLPKPPLPSGISFASRLATRSLPRWSLPEKAMPKEVAYQNIHDELQLDANPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNIIASLFNAPMEEGECGVGVGTVGSSEAIMLAGLAFKKKWQNMRRAQGKPFDKPNIVTGSNVQVCWEKFARYFEVELKQVKVREGDYVMDPQRAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLQQKNKQIGWDTPIHVDAAIGGFVAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVLWRTKQDLPQDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYRNVMENCRENSKVVKEGIVNTGCFNILSKDNGAPVVAFSLKDRSRHDEFKISAMLRRHGWIVPAYPMPPGADHITVLRVVIRAEFSRTLAERLVMDITNVLHQLEMLPHQYINDHHEATMNNDHNNIEGVKKRITSSEAVRRKIIAQEAKRRQKILAA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0064 498 CDD DOPA_deC_like 59 437 - -
Acco11g0064 498 FunFam Glutamate decarboxylase 15 65 - -
Acco11g0064 498 SUPERFAMILY PLP-dependent transferases 22 444 IPR015424 -
Acco11g0064 498 FunFam Glutamate decarboxylase 66 360 - -
Acco11g0064 498 PANTHER GLUTAMATE DECARBOXYLASE 17 488 IPR010107 GO:0004351|GO:0006536|GO:0030170
Acco11g0064 498 Gene3D - 361 448 - -
Acco11g0064 498 NCBIfam glutamate decarboxylase 18 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Acco11g0064 498 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Acco11g0064 498 Gene3D - 14 65 - -
Acco11g0064 498 FunFam Glutamate decarboxylase 361 448 - -
Acco11g0064 498 Gene3D - 66 359 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0064 Acco-ChrAcco11 854010 857189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0064 17 472 Calmodulin-binding Proteins AT5G17330 76.035 0.0 736