Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0049 ATGGAAAAACTCCCACTTCTTCAGATTTTTCCACTTATCTTTCTCATCACTTCTCTTTTCTTCCCTCACCAAGTTACAGCTTCACCATCATCCCTCAAGACTGATGCACAGGCTCTTCTCATGTTCAAGAAGACAATCCAGAAGGACCCTGATAGGGTATTGTCCACGTGGCAGGTGAGCAGAGATCCTTGTACCTGGTATGGAGTTTCCTGCACAGCAAGACGTGTCACTCAGCTTGATCTTAGTGATAAAAATCTGGTTGGGACTTCTTTCACTGCCTTGTCTTCTTTGGATGTGTTGTCTGTTCTGAATTTGCATTTGAACTCTTTCCCTGTAAATTCCACTTCCTTGCTTGACCTTCCTTATAGTTTGACACAGCTTGATCTGTCCTTCACTGGAGTTTCAGGTTCTCTCCCAGAGAATTTTTTCTCCAACTGTCCTAATCTTGTCGTTATCAATCTTTCTTACAACAACTTGACAGGTCCTGTGCCTGAAAACTTCCTGTACTATTCAAATAAGCTTCAGTCTCTTGATATATCTTCAAACAATTTGACAGGGTCCATATCAAACTTGAAAATTGAGTGCAATTCCTTGTTGTTTCTTGATCTTTCTGGAAACCATTTATCAGATTCAATCCCATTTTCCTTGTCAAACTGTACCAGCCTTAAGACTTTGAATTTGGCACATAATCTGATTTCAGGGGAAATTCCAAAACCTCTGGGGCAGCTTATAGAGCTAGAGACAATTGATCTTTCTTATAATCAGATCACTGGTTGGATTCCTTTTGAGTTGGGAAATATTTGTGCTAGCCTTAAAGATCTAAGATTTTCTTTCAACAACATTTCGGGTTCGATTCCACCTACTTTTTCATCTTGCTCTAGCCTGCAGTATCTTGACATATCAAACAACAATATGTCAGGGCCATTACCAGATAAAATCTTTCAGAACTTACAATCAATTCAGGAAGTGCATTTGGGAAACAATGCTATCTCAGGACCGTTTCCTTCTTCAATATCATCATGCAAAAATTTGAGGATCTTGGACTTGAGCTCTAACAAAATCTCAGGATTCATTCCTCGAGATATATGTCCCGGGGCGGCTTCACTTGAGCAGATCAGAATGCCAGATAATCTCATCTCAGGAGAAATTCCAGCCGAGCTGTCAAAATGTTCGCAGTTGAAGACAATTGATTTTAGTCTGAATTATCTCAATGGCTCCATCCCTCCAGAGCTTGGGCAGCTTGAGAATCTTCAGCAGTTGATAGCATGGTTCAATGGGTTAGAAGGAAAAATCCCACCAGAATTAGGTAAATGCAAGAGTCTGAAGGATCTTATACTGAATAACAATCAGCTAAGTGGTGAGATTCCTGTTGAGTTATTCAATTGCAGCAATCTTGAATGGATTTCACTCACAAGCAATGGACTCACCGGTCAAATACCGCGTGAATTCGGGCAGTTGACTCGGTTAGCGGTTTTGCAGCTTGGAAACAACAGCTTGACAGGAGAGATACCAGGAGAACTAGCAAATTGTAGCAGTTTGGTGTGGTTGGACTTAAACAGCAACAAGCTCACTGGAGAGATCCCACCAAGACTTGGCAGGCAGCTTGGAGCGAAATCGTTGTTTGGTATTCTTTCGGGTAACACTTTAGTGTTTGTAAGAAATGTGGGGAATTCATGTAAAGGAGTTGGAGGGTTGCTAGAGTTTTCAGGAATCAGACCAGAAAGACTTCAGCAGGTGCCAACATTGAGGACATGTGATTTCACCAGATTGTATTCTGGTCCAGTTCTGAGTTATTTCACCAAGTACCAGACTTTGGAGTATCTTGATCTTTCATACAACGAGCTTCGTGGAAGAATCCCCGAAGAATTTGGTGACATGGTGGCCTTACAGGTTCTTGAATTGTCTCACAATCAGTTATCAGGAGAGATCCCTTCATCACTTGGCCAGCTTAAGAATTTAGGTGTCTTTGATGCATCACATAACAGGCTGCAAGGTTATATCCCAGACTCATTCTCAAACCTATCATTTCTGGTGCAGATTGATCTGTCTAACAACGAGTTAACCGGGCAAATCCCGTCTAGAGGACAACTAAGTACACTTCCAGCCAGCCAGTATGCAAACAACCCAGGACTTTGTGGCGTTCCACTGCCCGATTGTCAGAGCGATAACAACCAACCAACAGAATATCCAACCACTGATGACAACAAAGGAAGCCATAAAGGAGCAGCTGGATCATGGGCAAATAGTATTGTCATGGGAGTTCTTATTTCCATTGCTTCTGTCTGTATCTTGATCGTGTGGGCGATTGCAATGCGTGCGAGGAGGAGGGAAGCCGAGGAAGTTAAGATGCTCAGCAGCTTGCAAGCATCTCATGCAGCCACAACATGGAAGATTGACAAGGAGAAAGAACCCTTGAGCATTAATGTGGCAACATTTCAAAGACAACTAAGGAAGCTCAAGTTCTCACAATTGATTGAAGCAACTAATGGCTTCTCAGCAGCTAGCCTCATTGGTTGTGGTGGCTTTGGAGAAGTGTTTAGGGCAACACTAAAGGATGGTTCAAGTGTTGCAATAAAAAAACTCATCCGGTTAAGCTGCCAAGGCGATCGGGAATTCATGGCAGAGATGGAAACCTTGGGGAAGATCAAACATAGAAATCTTGTACCTTTATTGGGATACTGTAAAGTTGGTGAAGAGAGACTTCTTGTTTATGAGTACATGGAATATGGAAGCCTTGAAGAAATGCTTCATGGAAGAACAAAGACACGAGATAGGCGAATGCTGACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCAAAAGGACTTTGTTTCCTACATCACAATTGTATCCCACACATAATACACAGAGACATGAAATCAAGCAATGTGTTGCTTGATCATGAAATGGAGGCTAGAGTTTCAGACTTTGGAATGGCAAGACTAATAAGTGCACTTGACACTCATCTAAGTGTTAGCACACTAGCAGGAACACCCGGCTATGTTCCACCGGAGTACTACCAAAGTTTCCGGTGCACTGCGAAGGGTGATGTGTATTCCTTTGGAGTTGTCATGCTGGAACTTCTTTCCGGGAAACGCCCTACTGATAAGGAGGACTTTGGCGACACTAACTTGGTGGGATGGGCGAAAATGAAGGTACGTGAAGGGAAGCAGAGGGAAGTGATAGATCCTGAGTTGCTTTTGGTGACTAAGGGAACAGATGAAGCAGAAGTTAAAGAGGTGAAAGAGATGATAAGGTATTTAGAGATAACATTACAATGTGTTGATGATCATGCTTCCAGGAGGCCAAACATGTTGCAGGTAGTGGCCATGCTGAGAGAGTTGATGCTGGGATCGGCCGATGGAAGCAGCAACAGTGCTTGA 3387 0.4284 MEKLPLLQIFPLIFLITSLFFPHQVTASPSSLKTDAQALLMFKKTIQKDPDRVLSTWQVSRDPCTWYGVSCTARRVTQLDLSDKNLVGTSFTALSSLDVLSVLNLHLNSFPVNSTSLLDLPYSLTQLDLSFTGVSGSLPENFFSNCPNLVVINLSYNNLTGPVPENFLYYSNKLQSLDISSNNLTGSISNLKIECNSLLFLDLSGNHLSDSIPFSLSNCTSLKTLNLAHNLISGEIPKPLGQLIELETIDLSYNQITGWIPFELGNICASLKDLRFSFNNISGSIPPTFSSCSSLQYLDISNNNMSGPLPDKIFQNLQSIQEVHLGNNAISGPFPSSISSCKNLRILDLSSNKISGFIPRDICPGAASLEQIRMPDNLISGEIPAELSKCSQLKTIDFSLNYLNGSIPPELGQLENLQQLIAWFNGLEGKIPPELGKCKSLKDLILNNNQLSGEIPVELFNCSNLEWISLTSNGLTGQIPREFGQLTRLAVLQLGNNSLTGEIPGELANCSSLVWLDLNSNKLTGEIPPRLGRQLGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLQQVPTLRTCDFTRLYSGPVLSYFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGYIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPDCQSDNNQPTEYPTTDDNKGSHKGAAGSWANSIVMGVLISIASVCILIVWAIAMRARRREAEEVKMLSSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFRATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKTRDRRMLTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVREGKQREVIDPELLLVTKGTDEAEVKEVKEMIRYLEITLQCVDDHASRRPNMLQVVAMLRELMLGSADGSSNSA 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0049 1128 Gene3D Transferase(Phosphotransferase) domain 1 907 1124 - -
Acco11g0049 1128 Gene3D Ribonuclease Inhibitor 171 719 IPR032675 -
Acco11g0049 1128 Pfam Leucine Rich Repeat 343 363 IPR001611 GO:0005515
Acco11g0049 1128 SMART serkin_6 831 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0049 1128 SUPERFAMILY L domain-like 568 715 - -
Acco11g0049 1128 Pfam Leucine rich repeat 123 184 IPR001611 GO:0005515
Acco11g0049 1128 Pfam Leucine rich repeat 463 523 IPR001611 GO:0005515
Acco11g0049 1128 Pfam Leucine rich repeat 270 330 IPR001611 GO:0005515
Acco11g0049 1128 Pfam Leucine rich repeat 598 639 IPR001611 GO:0005515
Acco11g0049 1128 Pfam Brassinosteroid receptor island domain 541 599 IPR045381 -
Acco11g0049 1128 ProSiteProfiles Leucine-rich repeat profile. 343 364 IPR001611 GO:0005515
Acco11g0049 1128 FunFam serine/threonine-protein kinase BRI1-like 2 907 1124 - -
Acco11g0049 1128 FunFam serine/threonine-protein kinase BRI1-like 2 792 906 - -
Acco11g0049 1128 SUPERFAMILY Protein kinase-like (PK-like) 812 1113 IPR011009 -
Acco11g0049 1128 SUPERFAMILY L domain-like 33 310 - -
Acco11g0049 1128 Gene3D - 544 600 - -
Acco11g0049 1128 ProSitePatterns Protein kinases ATP-binding region signature. 837 860 IPR017441 GO:0005524
Acco11g0049 1128 Gene3D Ribonuclease Inhibitor 34 167 IPR032675 -
Acco11g0049 1128 Gene3D Phosphorylase Kinase; domain 1 789 906 - -
Acco11g0049 1128 SUPERFAMILY RNI-like 212 530 - -
Acco11g0049 1128 SMART LRR_typ_2 626 650 IPR003591 -
Acco11g0049 1128 SMART LRR_typ_2 341 365 IPR003591 -
Acco11g0049 1128 SMART LRR_typ_2 243 266 IPR003591 -
Acco11g0049 1128 SMART LRR_typ_2 486 510 IPR003591 -
Acco11g0049 1128 SMART LRR_typ_2 511 534 IPR003591 -
Acco11g0049 1128 SMART LRR_typ_2 439 462 IPR003591 -
Acco11g0049 1128 SMART LRR_typ_2 414 438 IPR003591 -
Acco11g0049 1128 SMART LRR_typ_2 292 316 IPR003591 -
Acco11g0049 1128 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Acco11g0049 1128 FunFam serine/threonine-protein kinase BRI1-like 2 34 144 - -
Acco11g0049 1128 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 564 723 - -
Acco11g0049 1128 Pfam Leucine Rich repeat 218 235 IPR001611 GO:0005515
Acco11g0049 1128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 269 1115 - -
Acco11g0049 1128 MobiDBLite consensus disorder prediction 719 740 - -
Acco11g0049 1128 Pfam Protein tyrosine and serine/threonine kinase 835 1112 IPR001245 GO:0004672|GO:0006468
Acco11g0049 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 269 358 - -
Acco11g0049 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Acco11g0049 1128 SMART LRR_sd22_2 243 264 - -
Acco11g0049 1128 SMART LRR_sd22_2 292 319 - -
Acco11g0049 1128 SMART LRR_sd22_2 650 676 - -
Acco11g0049 1128 SMART LRR_sd22_2 341 356 - -
Acco11g0049 1128 SMART LRR_sd22_2 171 193 - -
Acco11g0049 1128 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 364 551 - -
Acco11g0049 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 192 268 - -
Acco11g0049 1128 ProSiteProfiles Leucine-rich repeat profile. 173 195 IPR001611 GO:0005515
Acco11g0049 1128 ProSiteProfiles Protein kinase domain profile. 831 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0049 1128 CDD STKc_IRAK 837 1116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0049 Acco-ChrAcco11 708131 711517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0049 7 1116 Receptor kinase-like Gene Family AT1G55610 48.219 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Acco11g0049 PK_Tyr_Ser-Thr 1.3e-43 CL0016