Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0027 ATGGGCAGTTGCGGAAGGGAAGGATCAGTGAGGCAGTACATACGATCCAAAGTGCCTCGTCTGCGATGGACTCCTGAACTTCATCGCTGCTTTGTTCACGCCATTGACACCCTCGGAGGTCATCACAAGGCGACGCCTAAGCTTGTTCTTCAGATGATGGATGTCAAAGGCCTTACTATTTCACACGTGAAGAGCCATCTCCAGATGTACAGAAGCATGAGAACTAATTTGGGGAGACAAGAGGGGAGTTCGAGCCAGCGTAGAAAGCAATCTTTTGAGGAACATGATGATGGGTGTGTTGATGAAGTGAATGATGGAGAAGCCGGTGGGGGTACTATTCAACATTGTTCAAAATTCGTGAGGAAAGAATCAGATTCCCCCAGGAGCTACAGTGATATATCACCTAAAAGAGCGAGAGTGGAGACGAGGAGTTGCATAGCAGGAACCGTGAGGAATCCGTACATATTTTATGATTACGTGCAGGTAATGGGTGAGCAGCGCAAGGGAATAAAGGAGTCTTCGTCTTCTTCCTCTTCTGCAACAATATCAATATGGCAGAATCAGCCTCCCTCCTCTCTTCTGCCACATTTTCCTAACCTTGCTTCTTTCAACCGGTATTCTGATTTCCCTCAGGGCAGGGAATTGATGAGCAGAAATGTGGCGAAGAATGATGACGCAGAAGCAGAAGGAGGAAGAGGATGTGAGCTGTCATTATCTCTCTCACTGCCCAATCATAATCAAAGGAATACGAATAGGAATAGGAGTATCAAGGCATGTTCAAGCAGTGAAATGAGTGAAGACATATCATTCATATCGTGTTCTTCTTCTGGCAAAGCCATAGACACTACTATTAACTTAGACTTGTCTATAGCCCTCTAAGGGAAAGCTTACCAGAAGAAGCGGTTGGGGCAAATGGCTCAACTGTGGCGACCACTAATAAGGCAATGGCCGTGGCCGGGCTCGCCCATGTCGAACCGTTGTTGCGGCATCGGCCTCCGTCATCTTCTCAGCTCGCCCTGTCTTCTTGAACATGCCAAGCCCACCTCTTCTACTTATTTCTCTTTGGTCCCTCTCGTTTCATCGTCTAATCGAAATCTCCATTTCCGCTCTCCCGCTCTTCAATTATCCGACGACCCCGTGCTTCAAGATGGAACTGACAGTGATGAATCGAGCACTGACGTTAAGAAGAGCCGCAATCAGCTGAAACGCGAGGCTAAGCGTGCTGTGCGTTGGGGTATGGAGCTGGCTTCTTTCTCTATTCCTCAAATCAAGCGAATTCTCAGAGCAGCTTCTGTGGAGCGAGAAGTGTTTGAAGCTCTGAAGCTGGTTAAGAGATTGAGACCGGATGTCCGCGAAGGAAGGAAGAGGCAGTTCAATTATATTGGGAAACTGCTGCGGGATGTGCAACCTGAATTGATGGATAAATTGATAGAAGCAACGAAGGATGGCAATCACAGTGAGCTACAAAAATTATGTGGCTCAGACTCTGAGGTTCTTGAAGGTGATGCTGACTTTACAGAATTTGAATCTGAAGAGGATGATGAGGAATCTGATTGGTGCATTGCTCGAGCAGCTAGGTGGTTTGATGGTCTGGCCAATAAGGATGTTAAAATCACCAATGAAGTTTATTCATTGCAGGAGGTTGAGTTTGATCGTCAGGAGTTACGCAAGCTTGTGAGAAGGGTGCACTCAGCCCAGGAACAGCAAGCTGCTGAAGAAGCAGAGGCAGAAGTAGAAGCAGCGAAAATTCGGGCTCAAAAGGCTCTCACTCGTTTTCTTCTTTCCATTGCAAGACAAATTCCTCATGAATTTTGA 1815 0.4689 MGSCGREGSVRQYIRSKVPRLRWTPELHRCFVHAIDTLGGHHKATPKLVLQMMDVKGLTISHVKSHLQMYRSMRTNLGRQEGSSSQRRKQSFEEHDDGCVDEVNDGEAGGGTIQHCSKFVRKESDSPRSYSDISPKRARVETRSCIAGTVRNPYIFYDYVQVMGEQRKGIKESSSSSSSATISIWQNQPPSSLLPHFPNLASFNRYSDFPQGRELMSRNVAKNDDAEAEGGRGCELSLSLSLPNHNQRNTNRNRSIKACSSSEMSEDISFISCSSSGKAIDTTINLDLSIALXGKAYQKKRLGQMAQLWRPLIRQWPWPGSPMSNRCCGIGLRHLLSSPCLLEHAKPTSSTYFSLVPLVSSSNRNLHFRSPALQLSDDPVLQDGTDSDESSTDVKKSRNQLKREAKRAVRWGMELASFSIPQIKRILRAASVEREVFEALKLVKRLRPDVREGRKRQFNYIGKLLRDVQPELMDKLIEATKDGNHSELQKLCGSDSEVLEGDADFTEFESEEDDEESDWCIARAARWFDGLANKDVKITNEVYSLQEVEFDRQELRKLVRRVHSAQEQQAAEEAEAEVEAAKIRAQKALTRFLLSIARQIPHEF 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0027 604 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Acco11g0027 604 CDD YjgA-like 396 563 IPR006839 -
Acco11g0027 604 SUPERFAMILY PSPTO4464-like 407 576 IPR023153 -
Acco11g0027 604 PANTHER OSJNBB0026I12.6 PROTEIN 305 602 - -
Acco11g0027 604 MobiDBLite consensus disorder prediction 377 399 - -
Acco11g0027 604 Gene3D - 18 75 - -
Acco11g0027 604 MobiDBLite consensus disorder prediction 71 120 - -
Acco11g0027 604 Gene3D - 406 485 IPR023153 -
Acco11g0027 604 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
Acco11g0027 604 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Acco11g0027 604 Pfam Protein of unknown function (DUF615) 395 593 IPR006839 -
Acco11g0027 604 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Acco11g0027 604 MobiDBLite consensus disorder prediction 71 85 - -
Acco11g0027 604 Coils Coil 548 591 - -
Acco11g0027 604 FunFam Myb family transcription factor 17 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0027 Acco-ChrAcco11 483230 490092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0027 1 77 G2-like Transcription Factor Family AT1G14600 73.171 7.04e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco11g0027 DUF615 2e-36 No_clan