Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0007 ATGTCGTCTGAGTTCAAGTTAACAGGTAATCCAATCCCTGATCATCTGGGAAAAAGTCCAAATGTTAAAGTGGGAAGCACTGATGTAATAGCATCGCGTAGTCCTGAAAATGGTGCTATAGGAGGGAAGGTTTCTGAGGAACTTCAGTACTGTGTTGGCGATATGGATTTCATCTACAAGGACTCGCCATATGGGGAAATAAATGTGTCACTAGAAAGTAGGCACTCAAGTGGTGATGAAGAAGTTGATCCTATACCTCTGCCCCTTTCTTCAATCTCAAAATCTTTATTGGAACGCAGGTGGAATGACACAACACCTTATGCTTCTAAAATGAAGCTTCAGTCATGGTTTCAACTTCCAAATGGAAATTGGGAGTTGGGGAAGATAATATCAACTTCTGGAACTGAATCTGTTATTTCACTTTCTGATTGGAAGGATTTAAAGGTGAAAGGTGAAAGTTTGGTACCAGCAAATCCTGATATTCTTGATGGAGTGGATGATCTGATGCAACTTAGTTATTTAAATGAGCCTTCAGTTTTATACAATTTGCAACATAGATACAATCAAGATATGATCTATACGAAAGCTGGGCCAATTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTTCTTTGTATGGAAATGATTATATTGAAGCATACAGGCGGAAAACAATTGAAAGCCCTCATGTATATGCCATTACAGACGTGGCTACTCAGGAAATGATAAGAGGTCGCATTTTCTTTTCCAATGAAGTAAATCAATCCATTATTATAAGTGGCGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAGATAGCAATGCAATACTTGGCTGCTCTGGGAGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATACACTTCAGTGAGACTGGAAAGATATCGGGTGCTAATATTCAAACATTTTTGCTGGAAAAGGTAACTGTTCATTCTTTTGAACCTTACATTCCAGAGAAGTTGAACCTACGAAATGCAGAAGACTATAAATATCTCCAGCAGAGCAACTGTTATTTGATATCTGGAATTAATGATGCAGAGGAATTTAGCCTAGTCATGGATGCTTTGGATGTTGTCCACGTCAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTACTATGGCTAGGAAACATATCTTTTACTGTAATTGATAATGAAAATCATGTTCAAGTTGTAGAAGACGAGGCTCTGTTCAGCATCGCCAAATTGATAGGCTGTGACATTGGAGATCTTAAGTTGACTCTATCAAATCGCAACATGAAAGTTGGTAACGATAATATTGTTCAAAAGTTGAAGATATCACAGGCCATTGATGCTAGAGATGCTTTGGCGAAGTCAATATACGCTTGTCTGTTTGAGTGGTTGGTAGAGCAAATAAATAAATCACTTGCTGTTGGCAAAAGGCGTACAGGCAGATCAATCAGTATTCTAGATATATATGGGTTTGAATCATTTAATAGGAATAGTTTTGAACAGTTCTGTATCAATTATGCAAATGAGAGACTGCAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATACATAAAAGATGGCATTGACTGGGCAAAAGTTGAGTTTGAAGATAACCAAGACTGCCTCAATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGTTAGATGAAGAGTCCACTTTCCCTAATGGCTCAGATCTGACATTTGCAAACAAACTTAGGCAGCATTTGAATTCTAATTCATGTTTCAAAGGAGAGCGAGCCAAGGCCTTTACAGTGTGTCACTATGCTGGGGAGGTCACATACGACACAACTGGATTTCTAGAGAAAAACAGGGACCTATTGCACTTGGATTCCATTAAACTTTTATCGTCATGCAGGTGTCATCTTCCTAAGATATTTGCATCCTTTATGCTTAGTCAGTCTGAGAAGCCTGTAGTTGGTCACTTACACAAGTTAGGCGGGGCTGATTCCCAAAAGCTAAGTGTTGCAACAAAGTTCAAGGGTCAACTGTTCCAATTGATGCAAAGGTTGGAGAGCACCACCCCACATTTTATTCGCTGTATTAAGCCCAACAACCTCCAGTCTCCAGGATTATATGAGCAAGGTCTTGTGCTGCAGCAGCTCAAATGTTGTGGGGTACTAGAAGTTGTTCGAATATCAAGATCTGGCTTCCCTACTAGAATGTCTCACCTGAAGTTTGCCAGAAGATATGGTTTTCTTCTCTTTGAGAATGTTGCATCTCAAGATCCACTTGGTGTTTCAGTTGCAATTCTTCAGCAGTTTAATATTTCATCAGATATGTATCAAGTTGGTTACACAAAATTATTTTTTCGAACAGGCCAGATCGGAGTGCTTGAAGATACCAGAAATCGTACCCTCAATGGCATTTTACATGTCCAAAGTTGCTTCAGGGGTCACCAAGCTCGATGTTACCTGAAGGAACTTTGTGGTGGAATCATTACTCTTCAGTCTTTTATTAGGGGAGAGAACATCAGAAATGAATATGCAGCTTCACTTCGGAGACATAGGGCTGCTGTCCTCTTACAAAAGCGGATGAAAGCAATATTTGTAAGAAGCAGAATGAAGAATACTAATGAAGCTGCAATTGTTGTACAATCAATCATTCGTGGCTCGTTAATCAGGCGATGTTCAGGAGATTTAGGATCATTGAAATCTGAAGGCGTTAAGACAAATGAGTCGGATGAGGTACTGGTCAAGTCTTCTTTCATAACTGAATTACAGCGTCGGGTGCTCAAGGCAGAAGCTGCACTGAGAGAGAAAGAAGAGGAAAATGACATCCTCTACCAACGTCTCCAACAGGGCGAGAGCCGTTGGTCTGAGTATGAATTAAAGATGAAGTCCATGGAAGAAGTGTGGCAAAAACAAATGAGATCCCTACAGTCCAGCCTCTCCATTGCAAAGAAGAGCCTTGCGATTGATGATTTAGAAAGGAACTCAGATGGATCCGTCAATGCAAGTGATGAAAGAGACTATAGCTGGGATATAGGAAATAATCATAGAAGCCAAGAAAGCAATGGAACGAGATCAATGAGCGCAGGGCTGAGTGTTATCAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTTTTTGGTGATGATGCCAAGTTCTTGGTGGAGGTGAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAGACCAGGAGCTGAGAAGGCTGAAGCAGATGTTCGAAGCTTGGAAAAAGGATTATGATGCTAGGCTACGTGAAACCAAGGTCATTTTACATAAGCTTGGAACCGAAGAAGGTCCACTTGACAAAGTGAAGAAGAAATGGTGGGGGAGAAGGAACAGTACAAGGATAAATTGA 3450 0.402 MSSEFKLTGNPIPDHLGKSPNVKVGSTDVIASRSPENGAIGGKVSEELQYCVGDMDFIYKDSPYGEINVSLESRHSSGDEEVDPIPLPLSSISKSLLERRWNDTTPYASKMKLQSWFQLPNGNWELGKIISTSGTESVISLSDWKDLKVKGESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQHRYNQDMIYTKAGPILVAVNPFKKVSLYGNDYIEAYRRKTIESPHVYAITDVATQEMIRGRIFFSNEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKVTVHSFEPYIPEKLNLRNAEDYKYLQQSNCYLISGINDAEEFSLVMDALDVVHVSKEDQENVFAMLAAVLWLGNISFTVIDNENHVQVVEDEALFSIAKLIGCDIGDLKLTLSNRNMKVGNDNIVQKLKISQAIDARDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIKDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGSDLTFANKLRQHLNSNSCFKGERAKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIKLLSSCRCHLPKIFASFMLSQSEKPVVGHLHKLGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGLYEQGLVLQQLKCCGVLEVVRISRSGFPTRMSHLKFARRYGFLLFENVASQDPLGVSVAILQQFNISSDMYQVGYTKLFFRTGQIGVLEDTRNRTLNGILHVQSCFRGHQARCYLKELCGGIITLQSFIRGENIRNEYAASLRRHRAAVLLQKRMKAIFVRSRMKNTNEAAIVVQSIIRGSLIRRCSGDLGSLKSEGVKTNESDEVLVKSSFITELQRRVLKAEAALREKEEENDILYQRLQQGESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDLERNSDGSVNASDERDYSWDIGNNHRSQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYDARLRETKVILHKLGTEEGPLDKVKKKWWGRRNSTRIN 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0007 1149 PANTHER MYOSIN 156 1144 - -
Acco11g0007 1149 Gene3D - 878 917 - -
Acco11g0007 1149 ProSiteProfiles IQ motif profile. 898 927 IPR000048 GO:0005515
Acco11g0007 1149 CDD MYSc_Myo8 177 812 IPR036022 -
Acco11g0007 1149 Gene3D - 522 714 - -
Acco11g0007 1149 ProSiteProfiles Myosin motor domain profile. 163 824 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 Gene3D Kinesin motor domain 162 757 IPR036961 -
Acco11g0007 1149 SMART iq_5 897 919 IPR000048 GO:0005515
Acco11g0007 1149 SMART iq_5 874 896 IPR000048 GO:0005515
Acco11g0007 1149 SMART iq_5 848 870 IPR000048 GO:0005515
Acco11g0007 1149 SMART iq_5 825 847 IPR000048 GO:0005515
Acco11g0007 1149 Pfam IQ calmodulin-binding motif 900 916 IPR000048 GO:0005515
Acco11g0007 1149 Pfam IQ calmodulin-binding motif 830 847 IPR000048 GO:0005515
Acco11g0007 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 870 IPR027417 -
Acco11g0007 1149 FunFam Unconventional myosin-XIX 522 714 - -
Acco11g0007 1149 ProSiteProfiles IQ motif profile. 852 878 IPR000048 GO:0005515
Acco11g0007 1149 MobiDBLite consensus disorder prediction 1018 1050 - -
Acco11g0007 1149 Gene3D - 347 390 - -
Acco11g0007 1149 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 110 159 IPR004009 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 Pfam Myosin head (motor domain) 165 812 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 ProSiteProfiles IQ motif profile. 828 855 IPR000048 GO:0005515
Acco11g0007 1149 PRINTS Myosin heavy chain signature 193 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 PRINTS Myosin heavy chain signature 510 538 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 PRINTS Myosin heavy chain signature 563 591 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 PRINTS Myosin heavy chain signature 253 278 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 PRINTS Myosin heavy chain signature 295 322 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 MobiDBLite consensus disorder prediction 1 23 - -
Acco11g0007 1149 Coils Coil 944 978 - -
Acco11g0007 1149 Gene3D - 758 825 - -
Acco11g0007 1149 Gene3D - 830 877 - -
Acco11g0007 1149 SMART MYSc_2a 157 825 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco11g0007 1149 Gene3D Myosin VI head, motor domain, U50 subdomain 391 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0007 Acco-ChrAcco11 153032 169724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0007 1 1147 Myosins gene family AT1G50360 72.041 0.0 1687