Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0002 ATGTCTAACTCTGACGGAACTACCGCCAACGGTAACGGCGCAATCATTGACCCGCAGAGGCAGCAGCAGCAGTCATCTTCCGGGAACGGTGCTCTCGCCGTCAAGAAGCCGCCGTCTAAGGATCGTCATAGCAAGGTCGACGGCCGAGGTCGCCGTATTCGCATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACGCGTGAGTTGGGACACAAATCGGACGGTCAAACTATCGAGTGGCTCCTCCGCCAGGCCGAACCCTCCATCATAGCCGCCACCGGCACCGGCACTACTCCTGCGAGCTTCTCCACCGTTTCGGTCTCCGTACGCGGAGGCGGTAGCGGAGGAGGTTTGAACTCGCTGACGTTGTCTTCTACTACTTCTACTTCCCTTGACCATAAGCCCGCCCTGCTGGGTCCGACGCCCTTCATACTCGGAAAGCGCATACGGACCGCTGATGATGACGCTGCTAAGGATGACGGCGTCTCCGTGGGGCCCACTGTTGGTTCGATAGTAGGGCCGACGGCACCATCTGGGTTGTGGGCACTTCCGGCGAGGCCTGACTTCGGCCAGGTATGGAGCTTTGCTGCAGCTGCGGCCGCTCCTCCGCCTGAGATGGTGGTGCAGCCGGCGGTGGGCCAGGAAGTTCAGGCCGGAGAGATGATGAGCATCGATAATTTTGGAGTTGGCGGTGGCGATGTTGTTGGTATATATATTTGTTATCTATGGCCGTATGGCTTTGTTGTGTGTGGAAAGCAGAAGATTTTCTTAGCCGTATTTATTTAG 789 0.5767 MSNSDGTTANGNGAIIDPQRQQQQSSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGSGGGLNSLTLSSTTSTSLDHKPALLGPTPFILGKRIRTADDDAAKDDGVSVGPTVGSIVGPTAPSGLWALPARPDFGQVWSFAAAAAAPPPEMVVQPAVGQEVQAGEMMSIDNFGVGGGDVVGIYICYLWPYGFVVCGKQKIFLAVFI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0002 262 MobiDBLite consensus disorder prediction 36 51 - -
Acco11g0002 262 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Acco11g0002 262 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 131 IPR005333 GO:0003700
Acco11g0002 262 MobiDBLite consensus disorder prediction 1 51 - -
Acco11g0002 262 Pfam TCP family transcription factor 39 116 IPR017887 -
Acco11g0002 262 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0002 Acco-ChrAcco11 34733 35660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0002 5 209 TCP Transcription Factor Family AT5G23280 62.802 1.41e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco11g0002 TCP 1.4e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0002 11 34733 35660 Acco11g0002 11 34733 35660 ECH