Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2748 ATGACTGAGGCTGACCCTGCCGCCTCTCCCTCTCCCTCTCCCACTCCTTCCCTCGAACCTCCCCACAATGGCACCGCCGACTCGGAGGTCGCCGCTTCTTCAGACTTGGAACTCGTGGCGGGCGATGCCGACTTTTCTGGACTTGGAGACTCAAACGTTGCTGGCCGTGTCAAGGGACCCTGGTCTCCGGAGGAGGATGCCGTTCTCAGTCGATTGGTTGCCCAGTTTGGGGCAAGGAATTGGAGCATGATCGCGCGAGGGATACCCGGTCGCTCCGGCAAGTCGTGCCGTCTCCGTTGGTGTAATCAACTTGACCCCGGTGTTAAACGCAAGCCCTTTACTGAAGAAGAAGATCGTATTATAATTGCAGCCCATGCAATGCATGGAAACAAATGGGCAGCAATAGCTAGGCTTCTTCCAGGAAGAACAGATAATGCTATAAAAAATCACTGGAATTCTACACTTAAGCGCAAGTGCTTGGATCTTGGAAGATACGTACCAGTGGGTGCTGGCATGGTGGAAGAGGGCAGCCTTGAGGCCCCTGACAAAATAAAGGCATCTTCTGAAGAAACCATGTCAGCAGGGGATATCAATTCATTGAATCCTACACAAATTAAAAATGTCGGGATGGATGGTGGTATTATTCAGAATGAAGATAGTCTTCCAAGAAACGATGGCGCTGAAGTGGAGGAACATCCTACCCTGTGTCAACCAGTAGCACGTGTTAGTGCATTTAGTGTCTATAATCCTCCAAGCAGGACAACAGCTGGATCCACGTATTCAAGGATGCTCCCAATGCAGGGCCCTTTGATCCAATCGCCCAAAGTTGAAGTAGGAGCCTGCAAGCTATTTGAAGATGTTGGCTATGAGCCCATGGTTCCAGTGCAATGTGGTCATGGCTGCTGTTCTTCAAGTTCTCGGGAAAGCCTTTCTTGTGGTTTGCTACTAGGTCCTGAGTTCATTGACTATTTGGAGCCGCCCCCCTTTTCAAGTCATGAATTAATCTCTATAGCTACAGATTTGAACAATATTGCTTGGATCAAGAGTGGCCTAGATGCCAGAGTAACGGAGAATGCAGCAACCTCAACAGCATCTCAAGGTGTTGCTACTGTATTTCAAAATGGCTTCTTTGAGGAGGGAGCAAGCAAGTTTGTGGGTGTGATGCAAGATATATTATCAACGCAGATGTCTAGTCATCCATATGCAATGCCTGCAGAGGTTTGA 1224 0.4894 MTEADPAASPSPSPTPSLEPPHNGTADSEVAASSDLELVAGDADFSGLGDSNVAGRVKGPWSPEEDAVLSRLVAQFGARNWSMIARGIPGRSGKSCRLRWCNQLDPGVKRKPFTEEEDRIIIAAHAMHGNKWAAIARLLPGRTDNAIKNHWNSTLKRKCLDLGRYVPVGAGMVEEGSLEAPDKIKASSEETMSAGDINSLNPTQIKNVGMDGGIIQNEDSLPRNDGAEVEEHPTLCQPVARVSAFSVYNPPSRTTAGSTYSRMLPMQGPLIQSPKVEVGACKLFEDVGYEPMVPVQCGHGCCSSSSRESLSCGLLLGPEFIDYLEPPPFSSHELISIATDLNNIAWIKSGLDARVTENAATSTASQGVATVFQNGFFEEGASKFVGVMQDILSTQMSSHPYAMPAEV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2748 407 ProSiteProfiles Myb-like domain profile. 58 104 IPR001005 -
Acco10g2748 407 SMART sant 57 106 IPR001005 -
Acco10g2748 407 SMART sant 109 157 IPR001005 -
Acco10g2748 407 Pfam Myb-like DNA-binding domain 110 154 IPR001005 -
Acco10g2748 407 Pfam Myb-like DNA-binding domain 58 104 IPR001005 -
Acco10g2748 407 ProSiteProfiles Myb-like domain profile. 105 155 IPR001005 -
Acco10g2748 407 MobiDBLite consensus disorder prediction 1 34 - -
Acco10g2748 407 PANTHER MYB PROTEIN-RELATED 58 207 - -
Acco10g2748 407 FunFam Transcription factor MYB44 112 158 - -
Acco10g2748 407 Gene3D - 57 109 - -
Acco10g2748 407 CDD SANT 112 155 IPR001005 -
Acco10g2748 407 SUPERFAMILY Homeodomain-like 55 151 IPR009057 -
Acco10g2748 407 Gene3D - 112 158 - -
Acco10g2748 407 CDD SANT 60 102 IPR001005 -
Acco10g2748 407 FunFam MYB transcription factor 58 109 - -
Acco10g2748 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 104 IPR017930 -
Acco10g2748 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 159 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2748 Acco-ChrAcco10 37785493 37789940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2748 20 392 MYB Transcription Factor Family AT3G55730 46.939 1.20e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco10g2748 Myb_DNA-binding 6.2e-14 CL0123