Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2733 ATGGGAGAGGGAGGGACGTCAGGCTTTTGCAGAAGGAGTGGCAGCAAGTGTGGGCGTTGGAATCCAACGGCGGAGCAGGTGAAGCTTCTGAGTCAGCTCTTCGCGTCAGGTCTGCGAACACCCAGCACGGGCCAGATCCGGAAGATATCCGCTCTCCTCAGCTTTTACGGCCACGTTGAGAGCAAGAACGTCTTCTATTGGTTCCAGAACCATAAAGCCCGCGAACGCCGCAAACTCACTCCTCCTTCTTCTTCACCAATGTTCTACTCAGATACAGATAATCGAGTGGTGCCGGAGCCAGAGAGAGTGATGGAGACGCTTCAGCTCTTCCCCGTGGGGGAATCATCAGAAGCGGGGGAGCTGAGGATGCATGCTCATTGCAGAGACGACACCACGGAACCAGTGGAGCCCCCTCACTTGGATCTCCGCTTGAGCTTTCTCTAA 444 0.5563 MGEGGTSGFCRRSGSKCGRWNPTAEQVKLLSQLFASGLRTPSTGQIRKISALLSFYGHVESKNVFYWFQNHKARERRKLTPPSSSPMFYSDTDNRVVPEPERVMETLQLFPVGESSEAGELRMHAHCRDDTTEPVEPPHLDLRLSFL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2733 147 CDD homeodomain 19 78 IPR001356 GO:0003677
Acco10g2733 147 SUPERFAMILY Homeodomain-like 12 78 IPR009057 -
Acco10g2733 147 Gene3D - 15 78 - -
Acco10g2733 147 SMART HOX_1 15 82 IPR001356 GO:0003677
Acco10g2733 147 Pfam Homeodomain 17 77 IPR001356 GO:0003677
Acco10g2733 147 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Acco10g2733 147 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 12 79 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2733 Acco-ChrAcco10 37690631 37691161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2733 13 147 Wox Gene Family AT3G11260 49.102 4.30e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco10g2733 Homeodomain 6.5e-16 CL0123