Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2715 ATGGCTGTCTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGAAACAACGGCTTCACGGAGGCAGAGTTCGCCCTCAAAGAGGACTTCATCGAAAAGGGTGATACGACGTCGTCCGATTACGAGAAATTCTTCTTCTTGATGGTGCCGCCGCCACCGCCGGTCAGAGTCCGATCCTTTTCCCAATTTTCTGAAAAGCAATATGGCAAAGACTCTACGTCTTCGGACGATGAGTTTGTGAGCTTGGGCTCATCTACTTCGGGCGTTTGTTCTTCGGAATTCATCAATCCATATGGAATTCGCTCCTCATCCCAAACTCACAAAGATTCCGAATCTTCGTCAGATAGGTTATCTCAATTTGGCACAGCACGTGACTACCATGACTATGACATGCAAAATGAACCATATTGGTATAATGAGAAAGATGATGACGGTTTCATGACCCCCAGTTTTGAGGGGCCAGAGTTCCTTGGCTGTCAAAGTGAGGATAAGTTCATCATGACATCAGAAATGGAGAATCAACATGAAAATCTTCTGGAAAATAATTACAAAAGTGAAGTATTCCAAGCGGAGGGAAATGTTGATTGCATGGATAAACCATGCCTTTATAATCATTCTGATGTAGGAAATGAAAATGTGACTTGTTTAAAAGACTTTTGCCATATTGATAAGAAAGAGCAGCTCGAAGGAGGATTAGTTGGAGATGTTGAGAATCCTACTATTGTCTATAATTGTGAAGTTCCTTTTAGCAAACGCTCAGCAGGTTCAGGAGAGTCTTGTGGTGGAGATCCTTGTGATGACCGCTGCCCAAGTTTAAAGGAAATTCATCTGAATGATTTGCATTTAAAGGTTGTTGGGGATAGTTCCTCTACTGAATCTGCTCCAGAGAATTCTATGAACCAAACTTTTGACCTCTATCCTAACAGTAACAGCAATAAGGGGCAGAAAGCTCCCTATGACTTAACTATTGAAGTTGCTAAAACAGACCTGCTGAATGGACTCGCCAACTATAAAGCTCAAAATTATGGAGAATTCACTGAAGAATGCCAAGATCCAGAAAGTGCAGCAGATGGAGAAGATGTTACTGATGATGAGCTTTTAAAGTACACTCACGAGGATGAATATGAAGTATTTGACCTGAGAATTATCCATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAAGATCTGCCCATTGTGCTGAATGCAGTCATAGGCGGCAGGTACTATGTAACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGACGTCTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTAGATGAAATCAAACTTCTAAAGCTTGTCAATAAGAATGACCCAGCTGATAAACACCACATATTGCGACTTTATGATTACTTCTATCATCAGGAGCATCTATTCATTGTTACCGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATACAATCAAGAATCTGGTGGTGAGGCATATTTCACATTGAACAGATTACAGCTCATTACTCGTCAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACTGTGATCTGAAGCCAGAAAATGTTCTTATTAAAAGTTATAACAGATGTGAAATTAAAGTTATTGATCTGGGAAGCAGTTGCTTTCAATCAGACAATTTATGCCTATATGTACAGTCGCGATCCTATAGGGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGACATATGGTCTCTTGGTTGTATCTTGGCTGAGCTATGTTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTGCAATTATTCTCGCGCGCATGATTGGAATGCTTGGTCCTATTGATCTGGAGATGTTAGTTAGGGGCCAGGAAACGCACAAATATTTCACAAAAGAATATGATATTTACCATGTAAATGAGGAGACAAACCAATTGGAGTACATAATTCCAGAGGAGTGGTTGTTGGAGCAGCACCTGCAGGTTTCTGATACCATGTTTATTGACTTCGTCAGATTCTTGCTCAACACCAACCCAAGAAGGCGACCAACTGCAAGACAGGCACTAAAGCATCCATGGCTTTCCCATGTTTATGACTCCCAGTAG 2154 0.4113 MAVSDVGAVLEFLRNNGFTEAEFALKEDFIEKGDTTSSDYEKFFFLMVPPPPPVRVRSFSQFSEKQYGKDSTSSDDEFVSLGSSTSGVCSSEFINPYGIRSSSQTHKDSESSSDRLSQFGTARDYHDYDMQNEPYWYNEKDDDGFMTPSFEGPEFLGCQSEDKFIMTSEMENQHENLLENNYKSEVFQAEGNVDCMDKPCLYNHSDVGNENVTCLKDFCHIDKKEQLEGGLVGDVENPTIVYNCEVPFSKRSAGSGESCGGDPCDDRCPSLKEIHLNDLHLKVVGDSSSTESAPENSMNQTFDLYPNSNSNKGQKAPYDLTIEVAKTDLLNGLANYKAQNYGEFTEECQDPESAADGEDVTDDELLKYTHEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNAVIGGRYYVTEYLGSAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQLITRQCLEALQYLHSLGIIHCDLKPENVLIKSYNRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNEAVAIILARMIGMLGPIDLEMLVRGQETHKYFTKEYDIYHVNEETNQLEYIIPEEWLLEQHLQVSDTMFIDFVRFLLNTNPRRRPTARQALKHPWLSHVYDSQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2715 717 Pfam Protein kinase domain 410 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2715 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Acco10g2715 717 Gene3D Transferase(Phosphotransferase) domain 1 462 710 - -
Acco10g2715 717 Gene3D Phosphorylase Kinase; domain 1 403 489 - -
Acco10g2715 717 PANTHER DUAL SPECIFICITY PROTEIN KINASE 104 711 - -
Acco10g2715 717 SUPERFAMILY Protein kinase-like (PK-like) 398 714 IPR011009 -
Acco10g2715 717 ProSiteProfiles Protein kinase domain profile. 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2715 717 FunFam Putative serine/threonine-protein kinase dyrk2 402 489 - -
Acco10g2715 717 FunFam Serine/threonine-protein kinase ppk15 487 711 - -
Acco10g2715 717 SMART serkin_6 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2715 717 CDD PKc_DYRK_like 408 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2715 Acco-ChrAcco10 37586916 37591423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2715 405 705 MAP Kinase Gene Family AT5G19010 30.841 3.89e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Acco10g2715 Pkinase 1e-51 CL0016