Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2706 ATGGACGACCACCTTTCTTCCTCACCCACCACCGTTGCCACCGCCACTCCCTGCCCTACATCTCCTAATAACACCAAAACTGATTCTGCTCGCAAATGTAAAGGCAAAGGTGGTCCCGACAACAACAAATTTAGGTACCGTGGTGTCAGGCAGCGAAGCTGGGGCAAATGGGTCGCTGAGATTCGAGAGCCTCGCAAGCGTACCCGAAAGTGGCTGGGCACCTTCGCCACCGCAGAGGACGCCGCACGAGCCTACGACCGCGCTGCCATCATCCTCTATGGCTCCAGGGCTCAGCTCAATTTACAACCCTCCGCCGCCTCTTCTTCCCACTCTTCCTCATCTCGCGCCTCTGTCCCTTCTTCCTCTTCTCAAACCCTTCGTCCCTTGCTTCCCCGCCCATCTGGCCTTAGCTTCCCATTTTCCTCTGCCGCCACATCGGGTTTCTTGCCCTACGGGGTTCACCCCAATAATACTAATAATACTGATTATATCCCACAAATGATGTGTCCAGTGAATAATAATATGGTGCAACAGCATCGTCAAGTGGTGCAACTTCCCCAGAAAACGTATCAGTCCCCAGGACCTGATGGAAATATGGTCGGCAGCTCCAACACAGCAACCTCGTACAAGGATCAGCTGCTGCCGCAGCAACCGTCAAATCAATTGCAGCATCAGAATTATTGCATGCACGATGATATTAGTTCTCTGGTGAGTTCGGTTGGGTCAAGTTTGTGTGCCTCGCAGACACAGACAGTAGGTGCACCTGCGGATCTGTGGCCGTTGACGAATGAGGAAGACTACCCACCAAATCTATGGGACTGCTATAACGACACTTTCCTCTTTGATTTTTAA 852 0.5211 MDDHLSSSPTTVATATPCPTSPNNTKTDSARKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSAASSSHSSSSRASVPSSSSQTLRPLLPRPSGLSFPFSSAATSGFLPYGVHPNNTNNTDYIPQMMCPVNNNMVQQHRQVVQLPQKTYQSPGPDGNMVGSSNTATSYKDQLLPQQPSNQLQHQNYCMHDDISSLVSSVGSSLCASQTQTVGAPADLWPLTNEEDYPPNLWDCYNDTFLFDF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2706 283 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Acco10g2706 283 MobiDBLite consensus disorder prediction 29 45 - -
Acco10g2706 283 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Acco10g2706 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 20 236 - -
Acco10g2706 283 FunFam Ethylene-responsive transcription factor 2 45 103 - -
Acco10g2706 283 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Acco10g2706 283 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Acco10g2706 283 MobiDBLite consensus disorder prediction 1 45 - -
Acco10g2706 283 MobiDBLite consensus disorder prediction 104 130 - -
Acco10g2706 283 MobiDBLite consensus disorder prediction 1 28 - -
Acco10g2706 283 Pfam AP2 domain 45 93 IPR001471 GO:0003700|GO:0006355
Acco10g2706 283 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Acco10g2706 283 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Acco10g2706 283 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2706 Acco-ChrAcco10 37488089 37488940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2706 31 283 AP2-EREBP Transcription Factor Family AT2G40220 44.558 6.53e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco10g2706 AP2 9.3e-13 CL0081