Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2703 ATGGACGAATCATCTCTGCCAGCAACGATGATCTTCTCAGGCTTCTTACCAACTGGGTCATTGCTAGACTCGTTGGTTCACATATCTACTGAAGTTGCTTCCATGGAAAAATTCCCTTTTGTTCAACTCAGGAATGTCTCATCCATGATCAGGAGGGTGAAGCTTCTTTCTTCTCTGTTCGAGGAGATTCAGGAAACAGATTCCCCACTTCCTCCTTCTTCAATCCTGTGTTTCACAGAGCTCTTCTCTGTGATCAGAAGAGTGAAGCATTTGATCCAAGACTGCCAAGAAAGCAGCTCACTCTGGAGTCTCATACAGTTAGAGTTTATTTCCAATCAATTCTATGTGCTTGTAAAGGAGATGGGAAGGGCTTTAGATATTCTCCCTCTGAGCTTGCTCTACATCACAGCAGATACAAGAGAACAAGTGGAACTTCTGCACAAGCAAACAAAAGCGGTTGAGTTGTTCATTGATCCTCGTGAGCTGCAACGAAGAGAGCAGCTTCTGCATGTAATGGCCCATGACACACTACAGAACAAGAAGAACAAGGGATTTCCTGAATTTGGGAAGGTACAACCAATACTAAGCAGCATTGGTTTGAGAACCCCATCAGACTATGATAGAGAAATTTCAAAGCTAGAGACTGAAGCTCAGAATCAGGCAGGTACAGGGGGTTTAATCGTTATGTCTAATATACATAATCTCATATCTCTGGTTACTTATTCCAAATCCATGATATTCAGAGACGGTGAAAACGAGACAGATGAAGACTGTAAGCCAACAGTGTCCGCATTCACATATAAGAGCTCTGATAATTCTTTTTCTTCACCTTCTTCTCAGATGACACCGTCAGCACCTAATGTTCCTGACGAATTTCGTTGCCCAATTTCACTTGATTTAATGAGAGATCCAGTGATTGTATCATCTGGGCATACTTATGATCGAATTTCAATTGCACAGTGGATAAACTCGGGACATCACACTTGCCCAAAAAGTGGGCAAAGATTGATTCACACTGCTCTCATACCCAACTATGCATTGAAGAGTCTTGTGCAGCAATGGTGCTATGAGAATAACGTCTCAGTGAATGAGCCGACAACATCTTGTTCTTCTTCTACTTCGGAAAATCCCAACAGCAAGGACAACTCAAATGAAAATGCTGGCGACCATATCTCTGCTAAAAAAGCAGCCATAGATGCTGTCAAAATGACAGCAGAGTTTCTAGTGGGAAAATTGGCAACTGGGTCAGCTGAAATCCAAAGGCAGGCTGCTTATGAGCTAAGATTGCTAGCAAAAACTGGGATGGACAACCGAAGAATCATCGCCGAGGCAGGTGCAATTCCATTTCTACTGATATTACTAGGATCACATGATCCAAGAATCCAGGAGCATGCCGTCACGGCCTTGTTTAATCTCTCCATATTCAACAATAACAAGGTGTTGATAGTGGCTGCCGGAGCAGTGGATCACATAGTAGAAGTGCTTGAATCAGGAAAAACCATGGAGGCAAGGGAAAATGCAGCAGCAGCAATCTTTAGCTTGACTGTAGTTGATGACTGCAAGGTAGAAATCGGAGCTCGTCCAAGGGCCATACCCGCATTGGTAGGACTATTAAGAGAGGGCACTCCTATTGGGAAAAGAGATGCTGCTACTGCCATTTTCAACCTTGCAGTTTACAATCCTAACAAGGCCAAAATCGTTAATGCTGGAGCTGTTCCTTTGCTTGTCGAGTTGCTTATGGATGATAAGGCTGGAATCACAGATGATTCTTTGGCTGTGCTTGCTTTGCTTCTGGGTTGCTCTGAAGGTTTGGAGAAGATAAGGAATAGTAAAGAGTTGGTGCCCCTTTTGATTGATCTTCTGAGGTTTGGATCAGCCAAAGGGAAGGAGAATTCTATAACACTTTTGTTGGGGTTGTGCAAGGAAGAAGGTGAAGTGGTGGCAAGGAGACTATTGGCAAATCCTCGAAGCATTCCCTCTCTTCAAAGCCTGGCTGCCGATGGTTCTTTAAGAGCACGGAGGAAGGCCGATGCTTTGCTTAGACTGGTCAATAGGTGCTGCTCTCAGCCTCATCATTCTCTTTGA 2085 0.4384 MDESSLPATMIFSGFLPTGSLLDSLVHISTEVASMEKFPFVQLRNVSSMIRRVKLLSSLFEEIQETDSPLPPSSILCFTELFSVIRRVKHLIQDCQESSSLWSLIQLEFISNQFYVLVKEMGRALDILPLSLLYITADTREQVELLHKQTKAVELFIDPRELQRREQLLHVMAHDTLQNKKNKGFPEFGKVQPILSSIGLRTPSDYDREISKLETEAQNQAGTGGLIVMSNIHNLISLVTYSKSMIFRDGENETDEDCKPTVSAFTYKSSDNSFSSPSSQMTPSAPNVPDEFRCPISLDLMRDPVIVSSGHTYDRISIAQWINSGHHTCPKSGQRLIHTALIPNYALKSLVQQWCYENNVSVNEPTTSCSSSTSENPNSKDNSNENAGDHISAKKAAIDAVKMTAEFLVGKLATGSAEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLLILLGSHDPRIQEHAVTALFNLSIFNNNKVLIVAAGAVDHIVEVLESGKTMEARENAAAAIFSLTVVDDCKVEIGARPRAIPALVGLLREGTPIGKRDAATAIFNLAVYNPNKAKIVNAGAVPLLVELLMDDKAGITDDSLAVLALLLGCSEGLEKIRNSKELVPLLIDLLRFGSAKGKENSITLLLGLCKEEGEVVARRLLANPRSIPSLQSLAADGSLRARRKADALLRLVNRCCSQPHHSL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2703 694 Gene3D - 380 522 IPR011989 -
Acco10g2703 694 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 529 571 IPR000225 GO:0005515
Acco10g2703 694 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 363 IPR013083 -
Acco10g2703 694 Pfam Armadillo/beta-catenin-like repeat 560 595 IPR000225 GO:0005515
Acco10g2703 694 Pfam Armadillo/beta-catenin-like repeat 436 473 IPR000225 GO:0005515
Acco10g2703 694 SMART arm_5 518 558 IPR000225 GO:0005515
Acco10g2703 694 SMART arm_5 559 599 IPR000225 GO:0005515
Acco10g2703 694 SMART arm_5 389 432 IPR000225 GO:0005515
Acco10g2703 694 SMART arm_5 475 516 IPR000225 GO:0005515
Acco10g2703 694 SMART arm_5 434 474 IPR000225 GO:0005515
Acco10g2703 694 SMART arm_5 600 641 IPR000225 GO:0005515
Acco10g2703 694 SMART Ubox_2 291 354 IPR003613 GO:0004842|GO:0016567
Acco10g2703 694 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 445 487 IPR000225 GO:0005515
Acco10g2703 694 FunFam RING-type E3 ubiquitin transferase 500 687 - -
Acco10g2703 694 Gene3D - 523 685 IPR011989 -
Acco10g2703 694 ProSiteProfiles U-box domain profile. 287 361 IPR003613 GO:0004842|GO:0016567
Acco10g2703 694 MobiDBLite consensus disorder prediction 365 386 - -
Acco10g2703 694 SUPERFAMILY ARM repeat 405 681 IPR016024 -
Acco10g2703 694 Gene3D - 42 133 IPR036537 GO:0007166
Acco10g2703 694 SUPERFAMILY RING/U-box 278 362 - -
Acco10g2703 694 PANTHER U BOX DOMAIN-CONTAINING 44 686 - -
Acco10g2703 694 Pfam U-box domain 288 358 IPR003613 GO:0004842|GO:0016567
Acco10g2703 694 FunFam RING-type E3 ubiquitin transferase 287 361 - -
Acco10g2703 694 MobiDBLite consensus disorder prediction 365 388 - -
Acco10g2703 694 CDD RING-Ubox_PUB 289 341 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2703 Acco-ChrAcco10 37466638 37468722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2703 19 689 U-box Gene Family AT3G46510 37.666 4.17e-128 392