Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2697 ATGCTCGCCCAACTCTGTGGCTTCGCTTTGTGTTCCATCTCATCAAACTTGCTCTGTTTTCAAAAGCAAAACCCAATAATGGGTGGGAATTCGCCTTGTGCTTCATGCAAATTGCTCAGACGCCGATGCGCCAGAGACTGCATTTTCGCTCCCTATTTCCCTTCCGATGATCCCCAAAAGTTTGCCATCGTCCACAAGGTTTTTGGCGCCAGCAACGTAAGCAAAATGTTACAGGAACTTCCGGTGCACCAGAGAGCTGATGCTGTGAGCAGTCTAGTGTATGAAGCTAATGCAAGAGTGAGAGACCCGGTTTATGGTTGTGTTGGGGCCATATCGTACCTGCAAAACCAGGTTTCAGAGCTTCAAATGCAGCTCGCGCTGGCTCAGGCAGAGATACTCTGCATCCAGATCCCGAATGATCCGGTAGTGCTGCCGGAAAACCCAGAAATGAATGACCTTCCTCACTATCTCAATTTCACTTCTTCCGGCAATGTAATTCATCTCGATCACTCTCAAAAGAGAGAGAGCATCTTTGAACATGACTTGGTTTCTTGA 555 0.4775 MLAQLCGFALCSISSNLLCFQKQNPIMGGNSPCASCKLLRRRCARDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLALAQAEILCIQIPNDPVVLPENPEMNDLPHYLNFTSSGNVIHLDHSQKRESIFEHDLVS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2697 184 ProSiteProfiles LOB domain profile. 31 132 IPR004883 -
Acco10g2697 184 Coils Coil 111 131 - -
Acco10g2697 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 151 - -
Acco10g2697 184 Pfam Lateral organ boundaries (LOB) domain 32 129 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2697 Acco-ChrAcco10 37428874 37429537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2697 29 143 AS2 family AT2G30130 88.696 4.57e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco10g2697 LOB 1.3e-42 No_clan