Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2665 ATGTGCGCCTTCGATCCTCTGCTCGTATCGCCTCAAAATGTGAATCCGTTTTTGTGGTTTTGGCCCTCTCACAATACCTACCTTGTCTCTTTCTCCTCATCTTTCCTATATAACCCTACAATCCCTTTGCCTACCTCTTCAAACTCACCTACACAAAATCCCCTGTCCACAAGCAGCTTCCCTCCTATACGCAATATGGCTCTTTCACCATTCTCTGCAATCTCTCTTGTTTTCTTTCTTCTTCATCTTCAAAGCGCTTTTGGTGACTACGGAGGTTGGCAAAGTGGCCACGCCACATTTTATGGTGGCGGAGACGCATCCGGCACAATGGGGGGAGCTTGTGGGTATGGCAATTTGTACAGCCAAGGTTATGGGACAAACACTGCAGCACTGAGCACAGCTCTGTTCAACAATGGCCTCAGCTGTGGGTCTTGCTACGAGATGCGATGCGACAATGACCTCAAATGGTGCCTTCCCGGCGTCATCACCGTCACTGCCACCAACTTCTGTCCTCCTAACAATGGTTTGTCCAATGACAATGGTGGGTGGTGCAACCCTCCTCTGCAGCACTTTGATCTTGCTGAGCCTGCATTCCTAAAGATCGCTCAATACAGAGCCGGCATTGTTCCCATTTCTTTCAGAAGAGTGCCCTGTGTGAAGAAGGGAGGGATCAGATTTACAATCAACGGGCATTCGTATTTCAACTTGGTTTTGATTTCAAATGTGGGAGGAGCAGGGGATGTACAAGCGGCTTCAATCAAGGGGTCAAGGACAGGGTGGCAAACAATGTCAAGAAACTGGGGACAGAACTGGCAGAGCAACTCGTACCTGAATGGGCAGAGCCTCTCGTTCAAGGTCACCACCAGTGATGGCAAAACCGTCATTAGCAACAATGTTGCGCCTGCTAATTGGCAATTTGGTCAGACCTTTGAGGGTGCTCAATTTTAG 948 0.4895 MCAFDPLLVSPQNVNPFLWFWPSHNTYLVSFSSSFLYNPTIPLPTSSNSPTQNPLSTSSFPPIRNMALSPFSAISLVFFLLHLQSAFGDYGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCDNDLKWCLPGVITVTATNFCPPNNGLSNDNGGWCNPPLQHFDLAEPAFLKIAQYRAGIVPISFRRVPCVKKGGIRFTINGHSYFNLVLISNVGGAGDVQAASIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFKVTTSDGKTVISNNVAPANWQFGQTFEGAQF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2665 315 Pfam Expansin C-terminal domain 224 301 IPR007117 -
Acco10g2665 315 Gene3D - 82 218 IPR036908 -
Acco10g2665 315 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 233 312 IPR007117 -
Acco10g2665 315 SUPERFAMILY Barwin-like endoglucanases 92 241 IPR036908 -
Acco10g2665 315 PRINTS Expansin signature 181 198 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 198 211 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 150 161 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 123 137 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 234 255 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 298 314 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 222 234 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 269 290 IPR002963 GO:0009664
Acco10g2665 315 PRINTS Expansin signature 162 172 IPR002963 GO:0009664
Acco10g2665 315 SUPERFAMILY PHL pollen allergen 220 312 IPR036749 -
Acco10g2665 315 PRINTS Expansin/Lol pI family signature 260 274 IPR007118 GO:0005576
Acco10g2665 315 PRINTS Expansin/Lol pI family signature 298 312 IPR007118 GO:0005576
Acco10g2665 315 PRINTS Expansin/Lol pI family signature 132 150 IPR007118 GO:0005576
Acco10g2665 315 PRINTS Expansin/Lol pI family signature 92 107 IPR007118 GO:0005576
Acco10g2665 315 PRINTS Expansin/Lol pI family signature 110 128 IPR007118 GO:0005576
Acco10g2665 315 PRINTS Expansin/Lol pI family signature 206 222 IPR007118 GO:0005576
Acco10g2665 315 SMART dpbb_1 128 213 IPR007112 -
Acco10g2665 315 FunFam Expansin 82 219 - -
Acco10g2665 315 Gene3D - 223 315 IPR036749 -
Acco10g2665 315 FunFam Expansin 223 315 - -
Acco10g2665 315 PANTHER EXPANSIN-A15 73 315 IPR002963 GO:0009664
Acco10g2665 315 CDD DPBB_EXPA_N 92 218 - -
Acco10g2665 315 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 111 223 IPR007112 -
Acco10g2665 315 Pfam Lytic transglycolase 128 212 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2665 Acco-ChrAcco10 37240266 37241568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2665 71 315 Expansin Gene Family AT2G40610 81.301 3.27e-149 417